Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC010095.1-201ENST00000443543 144 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU7-180P-201ENST00000459240 63 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL121769.1-201ENST00000469473 401 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC107626.1-201ENST00000471084 183 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 YWHAEP4-201ENST00000505390 198 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 LRRC34P2-201ENST00000514850 553 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU2-69P-201ENST00000516061 100 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1281P-201ENST00000516223 105 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 SNORA31.6-201ENST00000516241 130 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC025165.5-201ENST00000602802 578 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL356280.1-201ENST00000603614 379 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC010378.1-201ENST00000619270 362 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC026585.1-201ENST00000619582 524 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC009831.4-201ENST00000620744 325 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC098679.4-201ENST00000624241 654 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AP003400.5-201ENST00000624827 617 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 RNA5SP393-201ENST00000363423 117 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 RNU6-483P-201ENST00000384088 108 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AL023284.1-201ENST00000403956 276 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AL133475.1-201ENST00000404414 305 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 RNU2-3P-201ENST00000410144 191 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 CYCSP33-201ENST00000414485 327 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 CALM1P1-201ENST00000442082 433 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AP001324.2-201ENST00000461163 319 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC073901.1-201ENST00000462471 408 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 MRPL42P6-201ENST00000486397 371 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 BTF3P12-201ENST00000519620 469 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 MTND4P7-201ENST00000523876 130 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC078814.3-201ENST00000553036 491 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC068790.6-201ENST00000602558 258 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC004492.1-201ENST00000607036 742 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 AC022418.1-201ENST00000624118 445 ntBASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CCDC60Q8IWA6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1090P-201ENST00000364065 94 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 Y_RNA.554-201ENST00000384672 102 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 CIR1P3-201ENST00000405137 479 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RN7SKP32-201ENST00000410167 303 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RNU4-26P-201ENST00000410270 107 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 MTND3P21-201ENST00000433774 331 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AL121601.2-201ENST00000438019 707 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 MTND1P34-201ENST00000438556 671 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 CCDC34P1-201ENST00000507441 517 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1038P-201ENST00000516516 104 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RNU6-835P-201ENST00000516974 104 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AP004607.1-201ENST00000524456 203 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 MIR3616-201ENST00000584070 92 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.44□□□□□ -2.02
CCDC60Q8IWA6 RMST_4.1-201ENST00000616886 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms