Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC008993.2-201ENST00000631744 806 ntBASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CDKL3Q8IVW4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 MIR412-201ENST00000362142 91 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 Y_RNA.22-201ENST00000362492 102 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 RNY1P12-201ENST00000364251 105 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 SNORA25B-201ENST00000365507 128 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 SNORA20.2-201ENST00000383922 131 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 RNU5A-2P-201ENST00000384337 116 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 SNORA8-201ENST00000384574 139 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 PGBD4P6-201ENST00000421501 610 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AL365203.2-201ENST00000423444 196 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 RPL7P43-201ENST00000478876 753 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 LRRC34P1-201ENST00000542742 915 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC109446.2-201ENST00000567872 497 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC026271.5-201ENST00000577873 130 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 MIR3915-201ENST00000578518 97 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 MIR548AC-201ENST00000585049 88 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC011494.1-201ENST00000596454 237 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 BNIP3P8-201ENST00000597863 560 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC096772.1-201ENST00000609146 564 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AL133173.2-201ENST00000614270 90 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC091304.6-201ENST00000619761 202 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC092656.1-203ENST00000624134 423 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AC007494.3-201ENST00000624660 743 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 AL157786.1-207ENST00000627771 695 ntBASIC1.67□□□□□ -2.14
CDKL3Q8IVW4 U8.3-201ENST00000363321 132 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 CALM2P2-201ENST00000428512 440 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AC104850.1-201ENST00000435940 476 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 snoU109.2-201ENST00000459316 135 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 MED28P2-201ENST00000475771 317 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 RBBP4P6-201ENST00000508098 202 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AC034114.1-201ENST00000520293 285 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AP005435.4-201ENST00000529514 284 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 GNAI2P1-201ENST00000541815 315 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 BNIP3P25-201ENST00000596023 559 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CDKL3Q8IVW4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.65□□□□□ -2.14
CDKL3Q8IVW4 MTND4P23-201ENST00000447723 1363 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RNY4P34-201ENST00000364779 95 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RNU6-169P-201ENST00000365336 107 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RNU6-61P-201ENST00000365528 109 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RNU6-1179P-201ENST00000384667 107 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 MIR10A-201ENST00000385043 110 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RNA5SP212-201ENST00000391223 107 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RPS3AP3-201ENST00000411933 242 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 OR9R1P-201ENST00000412200 877 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL358453.1-201ENST00000422522 250 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 CYCSP46-201ENST00000423569 204 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL627311.1-201ENST00000431514 115 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 SNRPFP4-201ENST00000456366 242 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 SCARNA24.1-201ENST00000516465 137 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 RN7SKP219-201ENST00000516825 296 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL138889.2-201ENST00000603883 242 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 Z99289.3-201ENST00000605586 594 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL121992.2-201ENST00000606262 256 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AC091834.1-201ENST00000614543 472 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AC008250.2-201ENST00000615261 205 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AC108479.2-201ENST00000617314 601 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 U6.42-201ENST00000618440 107 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AL603839.4-201ENST00000624658 1005 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 AC019226.2-201ENST00000625973 424 ntBASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDKL3Q8IVW4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 SNORD14B-201ENST00000364533 90 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 RNU6-72P-201ENST00000384285 79 ntBASIC1.64□□□□□ -2.15
CDKL3Q8IVW4 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms