Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC073534.2-201ENST00000620377 381 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 AC097372.5-201ENST00000623665 376 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
PRPF39Q86UA1 CTSLP2-204ENST00000629029 392 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 MIR6863-201ENST00000636112 90 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 MTND5P26-201ENST00000426018 1752 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
PRPF39Q86UA1 AL139276.1-201ENST00000311910 1001 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
PRPF39Q86UA1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 RNU2-23P-201ENST00000410545 195 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 RNU2-66P-201ENST00000410650 161 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC008267.5-201ENST00000424928 265 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.57□□□□□ -2
PRPF39Q86UA1 USP9YP14-201ENST00000430663 563 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AL606489.2-201ENST00000433886 234 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.57□□□□□ -2
PRPF39Q86UA1 AC008413.1-201ENST00000511864 177 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 MTND3P5-201ENST00000512798 333 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC069113.1-201ENST00000517763 267 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.57□□□□□ -2
PRPF39Q86UA1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.57□□□□□ -2
PRPF39Q86UA1 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.57□□□□□ -2
PRPF39Q86UA1 MIR3941-201ENST00000582572 103 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC002044.1-201ENST00000606707 158 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 uc_338.34-201ENST00000617467 174 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 U4atac.1-201ENST00000618345 95 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 OR5AK4P-201ENST00000635912 903 ntBASIC2.57□□□□□ -2
PRPF39Q86UA1 AC002543.1-201ENST00000299783 1954 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
PRPF39Q86UA1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PRPF39Q86UA1 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 MIR524-201ENST00000385242 87 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 RNU2-16P-201ENST00000410712 136 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 OOSP1P1-201ENST00000423265 274 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC009238.1-201ENST00000442165 424 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC124916.1-201ENST00000444020 547 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.56□□□□□ -2
PRPF39Q86UA1 AC009237.6-201ENST00000446969 424 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC073415.1-201ENST00000449240 153 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.56□□□□□ -2
PRPF39Q86UA1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.56□□□□□ -2
PRPF39Q86UA1 RPL23AP45-201ENST00000476406 468 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.56□□□□□ -2
PRPF39Q86UA1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.56□□□□□ -2
PRPF39Q86UA1 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 RNU6-586P-201ENST00000517265 104 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC109479.2-201ENST00000517842 174 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AP003034.1-201ENST00000534621 422 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC023050.3-201ENST00000541142 333 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.56□□□□□ -2
PRPF39Q86UA1 AC093249.1-201ENST00000567049 203 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC007336.1-201ENST00000576365 3828 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 MIR5583-1-201ENST00000580941 59 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
PRPF39Q86UA1 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AL713866.2-201ENST00000603579 219 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AL136363.2-201ENST00000604173 851 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AC007621.1-201ENST00000604544 437 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PRPF39Q86UA1 AP003400.5-201ENST00000624827 617 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 U4.7-201ENST00000638126 106 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 AL354685.2-201ENST00000448218 1447 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
PRPF39Q86UA1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.56□□□□□ -2
PRPF39Q86UA1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRPF39Q86UA1 RNU6-529P-201ENST00000363383 104 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 RNU6-266P-201ENST00000364225 107 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 Y_RNA.409-201ENST00000383990 98 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.55□□□□□ -2
PRPF39Q86UA1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PRPF39Q86UA1 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
PRPF39Q86UA1 RPL39P29-201ENST00000447779 157 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AL031274.1-201ENST00000450334 232 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC107401.1-201ENST00000503426 685 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.55□□□□□ -2
PRPF39Q86UA1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.55□□□□□ -2
PRPF39Q86UA1 RN7SKP24-201ENST00000515888 284 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.55□□□□□ -2
PRPF39Q86UA1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.55□□□□□ -2
PRPF39Q86UA1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.55□□□□□ -2
PRPF39Q86UA1 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 SNORD14A-201ENST00000606526 91 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC097065.2-201ENST00000608159 533 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC103591.3-201ENST00000608684 209 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
PRPF39Q86UA1 AC104237.2-201ENST00000612456 443 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms