Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MRPL49P2-201ENST00000521066 465 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AL121603.1-201ENST00000553815 142 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 MIR4431-201ENST00000579990 94 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 MIR4512-201ENST00000583257 77 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 IPO5P1-202ENST00000600039 287 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AC011603.4-201ENST00000611325 277 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AC005520.5-201ENST00000613926 164 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AC099669.2-201ENST00000616549 437 ntBASIC3.82□□□□□ -1.8
ATG4DQ86TL0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4DQ86TL0 AC027290.2-201ENST00000623210 18662 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 RNU6-270P-201ENST00000364131 105 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 SNORA70E-201ENST00000384492 135 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 RNU6-837P-201ENST00000391056 108 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 MIR1193-201ENST00000408109 78 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 RNU6-1064P-201ENST00000410626 104 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 Z85995.1-201ENST00000415547 335 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC009963.2-201ENST00000453431 138 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC022790.1-201ENST00000522872 204 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC006254.2-201ENST00000603259 279 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 SNX18P1Y-201ENST00000616231 511 ntBASIC3.81□□□□□ -1.8
ATG4DQ86TL0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4DQ86TL0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AL592437.2-201ENST00000421655 2434 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 RNU6-199P-201ENST00000362954 107 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 RNA5SP366-201ENST00000365454 123 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 MIR513A2-201ENST00000385249 127 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 RNU6-381P-201ENST00000391259 108 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 SNORA11-201ENST00000408789 128 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC243964.1-201ENST00000441814 261 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC074290.1-201ENST00000448883 135 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 U8.19-201ENST00000459095 133 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 UQCRHP4-201ENST00000471686 272 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC107027.2-201ENST00000512197 115 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 RNA5SP154-201ENST00000516193 111 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC100767.1-201ENST00000528178 123 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC127455.1-201ENST00000565496 145 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 TUG1_4.1-201ENST00000619464 181 ntBASIC3.8□□□□□ -1.8
ATG4DQ86TL0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4DQ86TL0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RNU6-578P-201ENST00000390980 103 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RNU6-1199P-201ENST00000411249 104 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RNU7-107P-201ENST00000459121 61 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AC025554.1-201ENST00000505641 188 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RAC1P5-201ENST00000512182 576 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 RNU6-155P-201ENST00000516347 100 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 SNORA43.2-201ENST00000516652 128 ntBASIC3.79□□□□□ -1.8
ATG4DQ86TL0 CYCSP26-201ENST00000534107 320 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms