Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 CALM2P2-201ENST00000428512 440 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC124916.1-201ENST00000444020 547 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC079382.1-201ENST00000493346 557 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC107401.1-201ENST00000503426 685 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 HMGB1P29-201ENST00000505659 499 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 RNU6-1315P-201ENST00000517187 99 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC025755.1-201ENST00000521306 278 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC008536.2-201ENST00000607284 349 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC015540.1-201ENST00000615828 501 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 MIR6863-201ENST00000636112 90 ntBASIC2.62□□□□□ -1.99
NPHP3Q7Z494 AC135776.4-201ENST00000624300 1904 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 RNU6-1083P-201ENST00000384022 107 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 SNORA75B-201ENST00000384053 137 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 RNU6-1029P-201ENST00000384109 107 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AL591704.1-201ENST00000432574 275 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC092473.1-201ENST00000441098 221 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 USP9YP8-201ENST00000441913 500 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 MTATP6P7-201ENST00000453315 681 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AL121769.1-201ENST00000469473 401 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC090096.1-201ENST00000489168 390 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC021739.1-201ENST00000559631 174 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 MIR4255-201ENST00000579351 72 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC068792.1-201ENST00000621354 417 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 AC024940.5-201ENST00000622889 474 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 U6.114-201ENST00000636407 96 ntBASIC2.61□□□□□ -1.99
NPHP3Q7Z494 OR4G2P-201ENST00000328113 903 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU6-1120P-201ENST00000362988 108 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 Y_RNA.116-201ENST00000363292 103 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU4-48P-201ENST00000365559 182 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU6-116P-201ENST00000384042 109 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 MIR301A-201ENST00000385261 86 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 SNORA67.5-201ENST00000391036 107 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU6-1025P-201ENST00000410629 104 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 HMGN2P10-201ENST00000448085 265 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC022364.2-201ENST00000457963 554 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU7-182P-201ENST00000459009 62 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 GZMAP1-201ENST00000503054 631 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 SNORA31.6-201ENST00000516241 130 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 RNU6-250P-201ENST00000516958 103 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 BTF3P12-201ENST00000519620 469 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AL157871.3-201ENST00000557231 293 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC008752.3-201ENST00000588113 712 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC005261.5-201ENST00000596280 355 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AL391813.1-201ENST00000603098 260 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 SNRPGP19-201ENST00000603826 189 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 AC124864.2-201ENST00000624736 186 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 U6.99-201ENST00000637524 83 ntBASIC2.6□□□□□ -1.99
NPHP3Q7Z494 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NPHP3Q7Z494 NACAP2-201ENST00000318548 624 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 Y_RNA.3-201ENST00000362331 103 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 MIR518E-201ENST00000385252 88 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 CALM2P3-201ENST00000400429 449 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 USP9YP6-201ENST00000413550 854 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 OR51A5P-201ENST00000415429 942 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 AC000111.3-201ENST00000433478 193 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 AC245517.4-201ENST00000448601 281 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.59□□□□□ -2
NPHP3Q7Z494 RNU6-572P-201ENST00000516724 80 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 RNU6-703P-201ENST00000516946 107 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 RNU6-685P-201ENST00000517088 95 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.59□□□□□ -2
NPHP3Q7Z494 AC006199.1-201ENST00000548728 219 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 AL121821.2-201ENST00000556081 394 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 MIR1273C-201ENST00000578669 77 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 MIR3199-1-201ENST00000582434 88 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 SEPT14P19-203ENST00000633205 211 ntBASIC2.59□□□□□ -2
NPHP3Q7Z494 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.59□□□□□ -2
NPHP3Q7Z494 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP3Q7Z494 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms