Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AF129408.1-201ENST00000608767 431 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 7SK.8-201ENST00000612110 250 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 7SK.11-201ENST00000615477 250 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC024581.2-201ENST00000619986 252 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 7SK.13-201ENST00000622040 250 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 ZNF849P-201ENST00000594711 1566 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 MIR101-1-201ENST00000362265 75 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 MIR1468-201ENST00000410600 86 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC139712.2-201ENST00000424302 339 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL589872.1-201ENST00000426602 288 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 RNU6-927P-201ENST00000516199 100 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.700-201ENST00000516806 100 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC012065.4-201ENST00000602445 679 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL355598.1-201ENST00000604169 202 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL365204.3-201ENST00000612448 685 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC130454.1-201ENST00000622948 401 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 MIR3529-201ENST00000637713 78 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 SNORA9.1-201ENST00000362412 131 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL109755.1-201ENST00000401791 649 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 RNA5SP100-201ENST00000410903 110 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 RNA5SP59-201ENST00000410922 110 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 RPEP5-201ENST00000441137 268 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC013828.1-201ENST00000481845 158 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 COX6CP6-201ENST00000490840 228 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 COX7A2P2-201ENST00000505291 250 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AC090115.3-201ENST00000553218 849 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 BNIP3P27-201ENST00000599991 412 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 CLIC4P2-201ENST00000601934 717 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL132822.1-201ENST00000617063 513 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.19□□□□□ -2.38
CSMD3Q7Z407 SEC63P2-201ENST00000503863 1939 ntBASIC0.19□□□□□ -2.38
CSMD3Q7Z407 RNU6-619P-201ENST00000365146 108 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.476-201ENST00000384347 108 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RNU6-160P-201ENST00000384591 107 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MIR506-201ENST00000384998 124 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 UBE2V1P4-201ENST00000425374 344 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RPS26P55-201ENST00000471178 356 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RPL30P1-201ENST00000488676 339 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC145146.1-201ENST00000496370 254 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 SCARNA16.2-201ENST00000516520 172 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 NRON-201ENST00000517270 370 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MTCO2P2-201ENST00000591258 225 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC069304.2-201ENST00000605154 435 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MIR6516-201ENST00000630554 81 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.185-201ENST00000363894 100 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 SNORD1A-201ENST00000364968 72 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RNU6-360P-201ENST00000390944 104 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC009518.2-201ENST00000418056 731 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MTCO3P5-201ENST00000433620 714 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC002542.1-201ENST00000440683 193 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RNA5SP290-201ENST00000517133 127 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AP001429.1-201ENST00000602568 530 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AL357094.1-201ENST00000603845 844 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 KATNBL1P5-201ENST00000605015 517 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC079416.3-201ENST00000624479 549 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC119674.1-220ENST00000641502 1048 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC092447.10-201ENST00000620607 1652 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AL159152.1-201ENST00000635019 2587 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 RNU6-1065P-201ENST00000384513 106 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.552-201ENST00000384665 112 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MIR608-201ENST00000384820 100 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MIR597-201ENST00000384968 97 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC069282.1-201ENST00000411911 526 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 PTGES3P4-201ENST00000426243 356 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 CYCTP-201ENST00000504253 315 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC022616.8-201ENST00000533569 253 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC126365.2-201ENST00000580630 379 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AC138627.2-201ENST00000624202 601 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 MIR198-201ENST00000637333 62 ntBASIC0.18□□□□□ -2.38
CSMD3Q7Z407 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.18□□□□□ -2.38
CSMD3Q7Z407 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CSMD3Q7Z407 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CSMD3Q7Z407 RNU6-819P-201ENST00000364116 107 ntBASIC0.17□□□□□ -2.38
CSMD3Q7Z407 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
CSMD3Q7Z407 AL117342.1-201ENST00000404861 406 ntBASIC0.17□□□□□ -2.38
CSMD3Q7Z407 AC114737.2-201ENST00000421583 173 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms