Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 AC002044.1-201ENST00000606707 158 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 AC090517.2-201ENST00000614966 680 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 MIR5739-201ENST00000619803 80 ntBASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUP54Q7Z3B4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC027514.1-201ENST00000588561 1603 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.38-201ENST00000362617 102 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.231-201ENST00000364358 102 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RNU6-843P-201ENST00000384454 104 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 MIR548F1-201ENST00000408667 84 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 OR9R1P-201ENST00000412200 877 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RPLP0P7-201ENST00000416050 667 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 SNRPEP10-201ENST00000420249 274 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 MTND1P4-201ENST00000435196 415 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 UBE2V1P8-201ENST00000437166 265 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RPL21P99-201ENST00000480369 423 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.654-201ENST00000497848 106 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC008526.1-201ENST00000509149 338 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AF213884.2-201ENST00000510417 903 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RN7SKP132-201ENST00000516001 208 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 RNU6-189P-201ENST00000516120 101 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC023050.3-201ENST00000541142 333 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AL118558.2-201ENST00000556294 238 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC023043.3-201ENST00000593113 385 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 VN1R80P-201ENST00000597126 338 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC005046.1-201ENST00000608515 625 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AC103705.1-201ENST00000619013 241 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 OR4G1P-203ENST00000641984 1631 ntBASIC2.5□□□□□ -2.01
NUP54Q7Z3B4 AL365361.1-201ENST00000566942 3481 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RNU6-78P-201ENST00000362897 107 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RNU6-451P-201ENST00000362921 107 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RNU6-487P-201ENST00000365430 104 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.573-201ENST00000384763 105 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RNA5SP219-201ENST00000390940 113 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 POLHP1-201ENST00000411806 470 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 EIF1P1-201ENST00000421436 341 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC112220.1-201ENST00000434628 355 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 HMGB1P31-201ENST00000437242 427 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 IFNA11P-201ENST00000446352 526 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AP001486.1-201ENST00000463339 476 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 RPL7P43-201ENST00000478876 753 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC011352.1-201ENST00000512300 793 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC027176.1-201ENST00000560204 514 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AP003465.2-201ENST00000602571 373 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 AC096772.1-201ENST00000609146 564 ntBASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.49□□□□□ -2.01
NUP54Q7Z3B4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 OR56A5-201ENST00000340110 738 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-37P-201ENST00000362692 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 SNORA5B-201ENST00000363786 132 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-11P-201ENST00000364234 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 Y_RNA.378-201ENST00000365652 113 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-25P-201ENST00000383873 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-1-201ENST00000383898 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-48P-201ENST00000384161 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-36P-201ENST00000384172 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-4P-201ENST00000384205 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-5P-201ENST00000384238 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-3P-201ENST00000384314 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-16P-201ENST00000384385 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 SNORD116-20-201ENST00000384529 92 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-15P-201ENST00000384534 107 ntBASIC2.48□□□□□ -2.01
NUP54Q7Z3B4 RNU6-2-201ENST00000384627 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms