Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RNU6-898P-201ENST00000365627 104 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 RNU6-517P-201ENST00000384362 110 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 RNU6-1127P-201ENST00000384580 107 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTR9Q6PD62 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AC096649.2-201ENST00000416186 393 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AL353621.1-201ENST00000418219 243 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.56□□□□□ -2
CTR9Q6PD62 AL627311.1-201ENST00000431514 115 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 RPL7P54-201ENST00000438336 674 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 RPS15AP27-201ENST00000449183 343 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AC090515.1-201ENST00000465295 476 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.56□□□□□ -2
CTR9Q6PD62 AC083798.1-201ENST00000472671 131 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AL163973.1-201ENST00000484753 577 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 MTND3P25-201ENST00000509243 135 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 RNU6-581P-201ENST00000516214 105 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AK6P1-201ENST00000540219 478 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 HIF1AP1-201ENST00000553642 175 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AL121821.2-201ENST00000556081 394 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.56□□□□□ -2
CTR9Q6PD62 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.56□□□□□ -2
CTR9Q6PD62 MIR5583-1-201ENST00000580941 59 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AC005498.1-201ENST00000592125 465 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AL355877.2-201ENST00000603670 358 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 APOOP1-201ENST00000604695 592 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AC098657.3-201ENST00000620434 263 ntBASIC2.56□□□□□ -2
CTR9Q6PD62 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.56□□□□□ -2
CTR9Q6PD62 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CTR9Q6PD62 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.55□□□□□ -2
CTR9Q6PD62 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 RNU6-1085P-201ENST00000363576 107 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU6-1322P-201ENST00000364309 107 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 Y_RNA.255-201ENST00000364581 97 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 Y_RNA.372-201ENST00000365599 102 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTR9Q6PD62 RNU6-45P-201ENST00000384471 107 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 RNU2-3P-201ENST00000410144 191 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU4-26P-201ENST00000410270 107 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AC016831.2-201ENST00000417179 352 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AL358075.3-201ENST00000426289 226 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 TIMM9P3-201ENST00000428659 274 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AL121890.1-201ENST00000435457 205 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTR9Q6PD62 AL161651.1-201ENST00000440882 223 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.55□□□□□ -2
CTR9Q6PD62 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC092001.1-201ENST00000453012 261 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU7-180P-201ENST00000459240 63 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RPS27P21-201ENST00000486977 252 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC104136.1-201ENST00000512969 394 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 Y_RNA.693-201ENST00000516641 110 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU6-1178P-201ENST00000516674 107 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 RNU6-835P-201ENST00000516974 104 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC023824.2-201ENST00000566185 400 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AC092325.1-201ENST00000566449 554 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 MIR5692A1-201ENST00000580523 69 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC091152.3-201ENST00000604227 325 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CTR9Q6PD62 AC010378.1-201ENST00000619270 362 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AP000553.5-201ENST00000641933 54 ntBASIC2.55□□□□□ -2
CTR9Q6PD62 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
CTR9Q6PD62 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SNORA16.2-201ENST00000390991 127 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SNORA48.3-201ENST00000391081 134 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 RNU6-607P-201ENST00000411283 108 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 CYCSP33-201ENST00000414485 327 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 C8orf59P1-201ENST00000429930 303 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 MTND3P21-201ENST00000433774 331 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.54□□□□□ -2
CTR9Q6PD62 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.54□□□□□ -2
CTR9Q6PD62 AC010095.1-201ENST00000443543 144 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.54□□□□□ -2
CTR9Q6PD62 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.54□□□□□ -2
CTR9Q6PD62 AC011005.2-201ENST00000487324 359 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.54□□□□□ -2
CTR9Q6PD62 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.54□□□□□ -2
CTR9Q6PD62 AL137161.1-201ENST00000532231 390 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.54□□□□□ -2
CTR9Q6PD62 TPRKBP2-201ENST00000565969 475 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.54□□□□□ -2
CTR9Q6PD62 LRRC37A5P-203ENST00000580181 585 ntBASIC2.54□□□□□ -2
CTR9Q6PD62 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms