Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 U3.6-201ENST00000363622 211 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 SNORD32A-201ENST00000364805 84 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNU6-43P-201ENST00000384302 107 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNU6-1222P-201ENST00000384615 107 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 MIR218-1-201ENST00000384999 110 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNU2-23P-201ENST00000410545 195 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AP000275.1-201ENST00000411943 390 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AL356968.1-201ENST00000416622 474 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 DBIP2-201ENST00000419076 262 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 FTH1P25-201ENST00000447665 469 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RPL22P13-201ENST00000493291 347 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC116337.1-201ENST00000509680 687 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC091874.1-201ENST00000511402 339 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNA5SP112-201ENST00000515937 99 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 RNU6-277P-201ENST00000516272 106 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC016727.1-205ENST00000605437 569 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC009233.1-201ENST00000616477 371 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC007792.1-201ENST00000623023 402 ntBASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ATPAF1Q5TC12 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.9□□□□□ -1.94
ATPAF1Q5TC12 AC080128.1-201ENST00000474389 1917 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RNU6-212P-201ENST00000362642 104 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 Y_RNA.40-201ENST00000362645 93 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RNU6-1059P-201ENST00000363752 98 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 U3.13-201ENST00000364804 214 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 Y_RNA.473-201ENST00000384333 102 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 MIR186-201ENST00000384988 86 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPL21P75-201ENST00000396599 483 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPL21P28-201ENST00000401418 483 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPS29P4-201ENST00000414733 161 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 USP9YP30-201ENST00000430729 455 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPL21P39-201ENST00000463605 483 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC087190.1-201ENST00000484462 480 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC093591.1-201ENST00000491435 481 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPL21P129-201ENST00000491732 478 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RPL21P16-201ENST00000495531 483 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 FGF7P4-201ENST00000509595 295 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 SMURF2P1-201ENST00000514992 481 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC245166.1-201ENST00000521012 253 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 RAB11AP2-201ENST00000545905 639 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC090616.3-201ENST00000582184 217 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 MIR3199-1-201ENST00000582434 88 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC073410.2-201ENST00000603240 332 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 U4.6-201ENST00000621618 127 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AL359757.2-201ENST00000624309 274 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 AC073476.4-201ENST00000628409 72 ntBASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ATPAF1Q5TC12 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 RNU6-486P-201ENST00000363116 107 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 RNU6-601P-201ENST00000384540 107 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC092427.1-202ENST00000430569 476 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 Y_RNA.635-201ENST00000459041 101 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 RNU1-143P-201ENST00000516296 146 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 RN7SKP40-201ENST00000517211 242 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 SCARNA20.6-201ENST00000517251 106 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 IMMP1LP2-201ENST00000552954 492 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 MIR4444-1-201ENST00000581696 74 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 MIR4444-2-201ENST00000584390 74 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC018889.1-201ENST00000605372 397 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 U3.45-201ENST00000607547 219 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 U1.23-201ENST00000610293 146 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 MIR8076-201ENST00000611401 83 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 RNU1-68P-201ENST00000615382 146 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 U1.39-201ENST00000621562 146 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC010329.5-201ENST00000623497 2174 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 MIR1302-1-201ENST00000637932 143 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 AC002543.1-201ENST00000299783 1954 ntBASIC2.89□□□□□ -1.95
ATPAF1Q5TC12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ATPAF1Q5TC12 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATPAF1Q5TC12 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
ATPAF1Q5TC12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATPAF1Q5TC12 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms