| CTSL3P | Q5NE16 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | Y_RNA.598-201 | ENST00000410480 | 95 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | SRIP3-201 | ENST00000413200 | 219 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | BTF3L4P1-201 | ENST00000413813 | 468 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | KRTAP25-1-201 | ENST00000416044 | 370 nt | APPRIS P1 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | LINC01780-201 | ENST00000420059 | 442 nt | TSL 2 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | FO680682.1-201 | ENST00000421261 | 345 nt | TSL 3 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | OOSP1P1-201 | ENST00000423265 | 274 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | LINC01509-202 | ENST00000423523 | 408 nt | TSL 3 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL645568.3-201 | ENST00000433683 | 316 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RPL7P54-201 | ENST00000438336 | 674 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC116562.3-201 | ENST00000506136 | 177 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC068587.5-201 | ENST00000528506 | 175 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | ANP32BP3-201 | ENST00000559213 | 706 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC005771.1-201 | ENST00000585581 | 349 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL121992.2-201 | ENST00000606262 | 256 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | MIR6845-201 | ENST00000613182 | 61 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL050303.3-201 | ENST00000613704 | 284 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | KLRA1P-202 | ENST00000510134 | 1410 nt | TSL 5 BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 1.73 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL356292.1-201 | ENST00000283110 | 373 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RNA5SP212-201 | ENST00000391223 | 107 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RN7SKP284-201 | ENST00000411002 | 343 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL030996.1-201 | ENST00000411430 | 235 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL162734.1-201 | ENST00000432858 | 157 nt | TSL 5 BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | TAF9P1-201 | ENST00000445421 | 515 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | TAF9P2-201 | ENST00000454958 | 515 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC073359.2-201 | ENST00000478814 | 351 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RPL23AP63-201 | ENST00000498752 | 471 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | HMGB3P17-201 | ENST00000504195 | 649 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | MTND2P33-201 | ENST00000506452 | 1031 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RNU6-1220P-201 | ENST00000517126 | 108 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC008741.1-201 | ENST00000569456 | 510 nt | TSL 3 BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC091135.1-201 | ENST00000585943 | 307 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC009977.1-201 | ENST00000586015 | 570 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC022022.2-201 | ENST00000602989 | 360 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL022161.1-201 | ENST00000604390 | 213 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AL133173.2-201 | ENST00000614270 | 90 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC091834.1-201 | ENST00000614543 | 472 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | RMST_4.1-201 | ENST00000616886 | 107 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC138649.3-201 | ENST00000622154 | 254 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 1.72 | □□□□□ -2.13 | | |
| CTSL3P | Q5NE16 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | ZNF736P3Y-201 | ENST00000428264 | 1465 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | PIK3C2G-203 | ENST00000535651 | 2497 nt | TSL 5 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | SNORA72.3-201 | ENST00000365074 | 132 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | RPS15AP10-201 | ENST00000432472 | 382 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL356124.2-201 | ENST00000442449 | 391 nt | TSL 5 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | RPL21P99-201 | ENST00000480369 | 423 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | SUB1-206 | ENST00000506237 | 908 nt | APPRIS P1 TSL 2 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC091917.1-201 | ENST00000506330 | 566 nt | TSL 4 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC124854.1-202 | ENST00000513779 | 339 nt | TSL 3 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | SCARNA24.1-201 | ENST00000516465 | 137 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC145141.2-201 | ENST00000518473 | 501 nt | TSL 3 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC023632.5-201 | ENST00000521010 | 491 nt | TSL 3 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC139497.1-201 | ENST00000524042 | 501 nt | TSL 5 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AP002453.2-201 | ENST00000533503 | 320 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | CYP2C61P-201 | ENST00000604072 | 290 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL136363.2-201 | ENST00000604173 | 851 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC024933.1-201 | ENST00000608472 | 348 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL159153.1-201 | ENST00000619688 | 317 nt | BASIC | 1.71 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | CEP57L1-223 | ENST00000523787 | 2522 nt | APPRIS ALT2 TSL 5 BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | TXNDC8-203 | ENST00000374511 | 472 nt | APPRIS ALT2 TSL 5 BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | BTLA-202 | ENST00000383680 | 726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | TRAJ50-201 | ENST00000390487 | 60 nt | APPRIS P1 BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | Y_RNA.597-201 | ENST00000410463 | 100 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL358453.1-201 | ENST00000422522 | 250 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC013410.2-201 | ENST00000422627 | 201 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | MTND5P25-201 | ENST00000430499 | 799 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL135908.1-201 | ENST00000431394 | 446 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AL591043.1-201 | ENST00000432461 | 424 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC000111.3-201 | ENST00000433478 | 193 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | MTATP6P16-201 | ENST00000434543 | 526 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC104850.1-201 | ENST00000435940 | 476 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | ZNF736P12Y-201 | ENST00000443152 | 1243 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | LINC02195-201 | ENST00000443373 | 294 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| CTSL3P | Q5NE16 | AC092802.2-202 | ENST00000444665 | 371 nt | TSL 5 BASIC | 1.7 | □□□□□ -2.14 | | |