| CDKL4 | Q5MAI5 | Y_RNA.40-201 | ENST00000362645 | 93 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | KIF27-203 | ENST00000376347 | 1030 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | Y_RNA.597-201 | ENST00000410463 | 100 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | INTS6L-AS1-201 | ENST00000430820 | 398 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MTND2P4-201 | ENST00000445034 | 1004 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL354949.1-201 | ENST00000446438 | 170 nt | TSL 2 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | HMGN2P18-201 | ENST00000450680 | 270 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL157400.4-201 | ENST00000455699 | 667 nt | TSL 1 (best) BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RPL9P9-202 | ENST00000466501 | 579 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC097375.2-201 | ENST00000510416 | 579 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | IFNG-AS1-201 | ENST00000536914 | 494 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC005776.1-201 | ENST00000603164 | 290 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MTATP6P2-201 | ENST00000603319 | 678 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC022893.3-201 | ENST00000607665 | 437 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MIR6078-201 | ENST00000611069 | 100 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC012593.1-211 | ENST00000625996 | 799 nt | TSL 5 BASIC | 1.05 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU6-560P-201 | ENST00000364007 | 108 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SNORA29-201 | ENST00000384183 | 140 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU6-72P-201 | ENST00000384285 | 79 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU6-1065P-201 | ENST00000384513 | 106 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MIR1305-201 | ENST00000408300 | 86 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | Y_RNA.595-201 | ENST00000410403 | 105 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL158013.1-202 | ENST00000419666 | 520 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | EIF1P1-201 | ENST00000421436 | 341 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RPS15AP10-201 | ENST00000432472 | 382 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SNRPFP4-201 | ENST00000456366 | 242 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC093852.1-201 | ENST00000503587 | 266 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC116563.1-201 | ENST00000505454 | 396 nt | TSL 3 BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MTCO3P27-201 | ENST00000514397 | 196 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | ZNF436-AS1-205 | ENST00000518600 | 376 nt | TSL 5 BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AP003049.1-201 | ENST00000529418 | 457 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC025678.1-201 | ENST00000567861 | 338 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC090398.1-202 | ENST00000580403 | 457 nt | TSL 2 BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC112220.2-201 | ENST00000605513 | 533 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | snoU13.31-201 | ENST00000607291 | 104 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC245297.2-201 | ENST00000610119 | 565 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC018926.1-201 | ENST00000616335 | 435 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC092140.2-201 | ENST00000618027 | 521 nt | BASIC | 1.04 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MIR412-201 | ENST00000362142 | 91 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNA5SP432-201 | ENST00000362480 | 116 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU6-462P-201 | ENST00000362659 | 105 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL390198.1-201 | ENST00000376445 | 320 nt | TSL 2 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | Y_RNA.623-201 | ENST00000411128 | 95 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | USP9YP33-201 | ENST00000412220 | 421 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC114763.2-201 | ENST00000412593 | 826 nt | TSL 2 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SNRPEP10-201 | ENST00000420249 | 274 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | C8orf59P1-201 | ENST00000429930 | 303 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL627311.1-201 | ENST00000431514 | 115 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC093639.1-201 | ENST00000441026 | 473 nt | TSL 2 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC092473.1-201 | ENST00000441098 | 221 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | GDI2P2-201 | ENST00000445131 | 608 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | NDUFB1P2-201 | ENST00000449477 | 176 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC114501.3-201 | ENST00000453648 | 164 nt | TSL 5 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL583843.1-201 | ENST00000456070 | 346 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC091770.1-201 | ENST00000456513 | 373 nt | TSL 2 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AP000907.2-201 | ENST00000530827 | 353 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | LRRC6P1-201 | ENST00000532188 | 885 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MIR3937-201 | ENST00000580135 | 106 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | MIR4295-201 | ENST00000585286 | 85 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AL353778.1-201 | ENST00000603149 | 408 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC006270.3-201 | ENST00000605967 | 1036 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | AC012676.2-201 | ENST00000619258 | 186 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | SCARNA4-202 | ENST00000625402 | 129 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CDKL4 | Q5MAI5 | snoU2_19.1-201 | ENST00000362361 | 80 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | SNORD3E-201 | ENST00000362899 | 217 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | MRPL35P3-201 | ENST00000421557 | 364 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AL139824.2-201 | ENST00000458731 | 1095 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC130509.1-201 | ENST00000464158 | 433 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC108078.1-201 | ENST00000508073 | 725 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC096711.1-201 | ENST00000510967 | 347 nt | TSL 5 BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC008837.2-201 | ENST00000513076 | 418 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | SNORA3.4-201 | ENST00000515969 | 96 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC016885.2-201 | ENST00000522598 | 261 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AP003128.1-201 | ENST00000531414 | 448 nt | TSL 2 BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC090115.3-201 | ENST00000553218 | 849 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC084756.1-201 | ENST00000558237 | 606 nt | TSL 5 BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AP001004.1-201 | ENST00000582468 | 324 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | FBXW7-AS1-201 | ENST00000605147 | 372 nt | TSL 1 (best) BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | AC097717.1-250 | ENST00000608498 | 273 nt | TSL 5 BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | SENP7-207 | ENST00000394095 | 4945 nt | APPRIS P3 TSL 1 (best) BASIC | 1.02 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | OR4G2P-201 | ENST00000328113 | 903 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | SNORD116-20-201 | ENST00000384529 | 92 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | MIR513A1-201 | ENST00000385138 | 129 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CDKL4 | Q5MAI5 | FCF1P10-201 | ENST00000407590 | 479 nt | BASIC | 1.01 | □□□□□ -2.25 | | |