Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 H3F3AP1-201ENST00000559984 334 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 AC091925.1-201ENST00000623204 462 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
CCDC178Q5BJE1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 RNA5SP383-201ENST00000362934 120 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 Y_RNA.145-201ENST00000363527 102 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 RPL32P35-201ENST00000415214 394 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC245291.1-201ENST00000419501 328 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC092047.1-201ENST00000424997 240 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 GSTA11P-201ENST00000452866 669 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 RPS27P29-201ENST00000463110 252 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC068781.1-201ENST00000488231 618 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 RNU6-1046P-201ENST00000516538 107 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC104027.1-201ENST00000521887 300 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC010653.1-201ENST00000571108 881 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC005899.2-201ENST00000584353 90 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC005014.2-201ENST00000607795 599 ntBASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC178Q5BJE1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 FAM35CP-201ENST00000554755 2470 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNU6-428P-201ENST00000362942 107 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNU6-490P-201ENST00000362985 107 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 SNORA9-201ENST00000384215 133 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC243428.1-201ENST00000421099 264 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 DAP3P1-201ENST00000441522 278 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNA5SP310-201ENST00000459084 116 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 MTND4LP22-201ENST00000508209 276 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNU1-103P-201ENST00000516502 125 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNU6-928P-201ENST00000516876 104 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNU6-1137P-201ENST00000517073 99 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 SNORD116.3-201ENST00000517176 78 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 RNA5SP380-201ENST00000517190 98 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC136443.5-201ENST00000603741 370 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 FTX_3.1-201ENST00000610451 147 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC004852.3-201ENST00000614131 326 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 AC027309.3-201ENST00000623419 351 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 FAM35BP-202ENST00000497389 3337 ntBASIC3.68□□□□□ -1.82
CCDC178Q5BJE1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 RNU6-884P-201ENST00000363889 107 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 MIR491-201ENST00000384877 84 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AL356057.3-201ENST00000402607 340 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 HMGN2P30-201ENST00000423237 256 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 MTND3P9-201ENST00000429526 346 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 SNORA64.4-201ENST00000516632 81 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AL110115.1-201ENST00000614396 364 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
CCDC178Q5BJE1 RNU6-898P-201ENST00000365627 104 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 RNU6-217P-201ENST00000384164 104 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 RNY1P14-201ENST00000384426 108 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 MRPL42P3-201ENST00000401492 326 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 AC018865.2-201ENST00000423631 129 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 MTCYBP10-201ENST00000424905 650 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 AC008267.5-201ENST00000424928 265 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 U8.21-201ENST00000459536 136 ntBASIC3.66□□□□□ -1.82
CCDC178Q5BJE1 AC133134.1-201ENST00000466800 359 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms