Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 PHBP14-201ENST00000512887 367 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 SCARNA11.3-201ENST00000517276 130 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AC005899.2-201ENST00000584353 90 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 RPS15AP11-201ENST00000594193 385 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AC008739.2-201ENST00000597006 317 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AP000654.2-201ENST00000605633 586 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 MIR3976-201ENST00000606807 139 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 AC090574.1-201ENST00000623186 233 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC144BQ3MJ40 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC144BQ3MJ40 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC144BQ3MJ40 KPNA2P1-201ENST00000458289 1591 ntBASIC3.9□□□□□ -1.78
CCDC144BQ3MJ40 MIR544A-201ENST00000384855 91 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 SNORA75.4-201ENST00000391278 119 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AL591034.2-201ENST00000402839 359 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 RN7SKP111-201ENST00000410349 271 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.594-201ENST00000410373 140 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AC138623.1-201ENST00000418060 216 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.653-201ENST00000459091 95 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 RN7SL504P-201ENST00000494496 287 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.718-201ENST00000517110 102 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AC109329.1-201ENST00000518744 317 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 APOOP3-201ENST00000536787 586 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 MIR5680-201ENST00000577577 84 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 MIR4273-201ENST00000582824 84 ntBASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC144BQ3MJ40 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AL109809.4-201ENST00000603520 2185 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-1010P-201ENST00000362757 107 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.58-201ENST00000362807 102 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.154-201ENST00000363624 102 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-1188P-201ENST00000363795 107 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNY3P1-201ENST00000365085 102 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNY3-201ENST00000365484 102 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 Y_RNA.490-201ENST00000384413 102 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNY4P36-201ENST00000391116 96 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 EIF4EP2-201ENST00000422816 654 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 MTND3P9-201ENST00000429526 346 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 Z75741.1-201ENST00000446793 314 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AP001324.2-201ENST00000461163 319 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 FCF1P8-201ENST00000510322 597 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 MRPS36P2-201ENST00000512569 299 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC011494.1-201ENST00000596454 237 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC009229.3-201ENST00000608056 282 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AL157817.1-201ENST00000614264 790 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 AC002064.3-201ENST00000623448 346 ntBASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC144BQ3MJ40 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RNA5SP374-201ENST00000362939 125 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-1141P-201ENST00000364520 107 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RNU6-692P-201ENST00000384496 107 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RNA5SP293-201ENST00000410527 113 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 EIF1AXP1-201ENST00000419267 435 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC236972.1-201ENST00000433225 199 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AL357552.1-201ENST00000445254 415 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 UBE2V1P7-201ENST00000446395 340 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 FTH1P25-201ENST00000447665 469 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RPL39P29-201ENST00000447779 157 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AP001486.1-201ENST00000463339 476 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RPS29P27-201ENST00000463711 170 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RN7SL594P-201ENST00000470590 287 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 RPS26P21-201ENST00000475397 348 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AL049873.1-201ENST00000480540 376 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 AC006483.1-201ENST00000487308 313 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 HMGN1P13-201ENST00000505795 138 ntBASIC3.88□□□□□ -1.79
CCDC144BQ3MJ40 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms