Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC016831.2-201ENST00000417179 352 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SNORD19B-201ENST00000459623 84 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC022493.1-201ENST00000492984 337 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MTND5P5-201ENST00000503764 376 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MTND3P25-201ENST00000509243 135 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SNORA9.3-201ENST00000516383 129 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 RNU6-273P-201ENST00000516937 96 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AP003122.3-201ENST00000526316 255 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC084851.1-201ENST00000529105 249 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 CYCSP39-201ENST00000565821 309 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AP000787.2-201ENST00000604432 568 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AC016727.1-205ENST00000605437 569 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 AL133255.1-201ENST00000606374 441 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MIR7515-201ENST00000637837 67 ntBASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNAI3Q3KNW1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.4□□□□□ -2.02
SNAI3Q3KNW1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.4□□□□□ -2.02
SNAI3Q3KNW1 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 RNA5SP387-201ENST00000364226 106 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL360182.1-201ENST00000397433 468 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SNORD88.1-201ENST00000408684 91 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 RNU2-3P-201ENST00000410144 191 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 HMGN2P35-201ENST00000412164 270 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL592148.1-201ENST00000413568 445 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL353621.1-201ENST00000418219 243 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SKA2P1-201ENST00000425592 390 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC092427.1-202ENST00000430569 476 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC236972.2-201ENST00000434979 310 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 FABP5P14-201ENST00000437273 393 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 MTND1P17-201ENST00000448961 204 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC107399.1-201ENST00000451226 265 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 S100A11P2-201ENST00000467589 312 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 RPS27AP10-201ENST00000496103 208 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC008716.1-201ENST00000511084 513 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SNORA70.24-201ENST00000517233 118 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 COX6CP5-201ENST00000527162 228 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AP005639.2-201ENST00000527592 928 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC007151.1-201ENST00000572774 483 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 MIR3605-201ENST00000583214 100 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 APOOP1-201ENST00000604695 592 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AC002044.1-201ENST00000606707 158 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 AL031601.2-202ENST00000622650 282 ntBASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.4□□□□□ -2.03
SNAI3Q3KNW1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 RNU6-266P-201ENST00000364225 107 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 SNORA68.1-201ENST00000364537 132 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 RNU6-1227P-201ENST00000383981 107 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 SNORA75B-201ENST00000384053 137 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AL139095.1-201ENST00000404326 391 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 RNU2-68P-201ENST00000410878 191 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 CYCSP33-201ENST00000414485 327 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AL354751.2-201ENST00000415471 210 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 BPY2DP-201ENST00000422208 265 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 GPM6BP2-201ENST00000432046 144 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 GPM6BP1-201ENST00000446387 144 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.635-201ENST00000459041 101 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC103975.1-201ENST00000482506 483 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC079140.5-201ENST00000507882 310 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 RN7SKP24-201ENST00000515888 284 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms