Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AP003392.2-201ENST00000527269 208 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC004908.3-201ENST00000610248 625 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AL356094.1-201ENST00000624663 1212 ntBASIC0.81□□□□□ -2.28
RFX7Q2KHR2 AC092125.1-201ENST00000562568 1995 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 MTND4P21-201ENST00000453886 1357 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 Y_RNA.178-201ENST00000363832 102 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
RFX7Q2KHR2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RFX7Q2KHR2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
RFX7Q2KHR2 RNU6-968P-201ENST00000384076 107 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AL139397.2-201ENST00000404529 772 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AL358176.2-201ENST00000425769 204 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.8□□□□□ -2.28
RFX7Q2KHR2 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 ELOCP30-201ENST00000447108 299 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC079776.3-201ENST00000450665 370 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC067942.3-201ENST00000512025 362 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 RNU2-53P-201ENST00000516257 147 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC092451.2-201ENST00000538746 658 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC093249.1-201ENST00000567049 203 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC013470.4-201ENST00000619978 986 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC097460.3-201ENST00000623099 442 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 MIR924-201ENST00000638017 53 ntBASIC0.8□□□□□ -2.28
RFX7Q2KHR2 AC245060.5-201ENST00000610778 3293 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 RNU6-858P-201ENST00000362436 107 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 Y_RNA.251-201ENST00000364551 99 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC139712.2-201ENST00000424302 339 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC008267.5-201ENST00000424928 265 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AL158053.1-201ENST00000441503 453 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC109329.1-201ENST00000518744 317 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 MTCO3P15-201ENST00000526563 574 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.79□□□□□ -2.28
RFX7Q2KHR2 SNRPGP1-201ENST00000553864 222 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 CYP4A27P-201ENST00000567218 190 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 AC012065.4-201ENST00000602445 679 ntBASIC0.79□□□□□ -2.28
RFX7Q2KHR2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 RNU6-1164P-201ENST00000364428 107 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 RNU6-16P-201ENST00000384385 107 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 SNORA48.1-201ENST00000390879 135 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 RNA5SP100-201ENST00000410903 110 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 RNA5SP59-201ENST00000410922 110 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 MTND5P14-201ENST00000441481 1267 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 SNORD116-28-201ENST00000516123 91 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AP003072.2-201ENST00000527756 676 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC136619.2-201ENST00000563361 631 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC012414.6-201ENST00000568241 401 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 VN1R83P-201ENST00000595685 445 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 CLIC4P2-201ENST00000601934 717 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC093788.1-201ENST00000609356 927 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC090970.3-201ENST00000612566 866 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AL078604.3-201ENST00000615580 211 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.78□□□□□ -2.28
RFX7Q2KHR2 AC092447.10-201ENST00000620607 1652 ntBASIC0.78□□□□□ -2.29
RFX7Q2KHR2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
RFX7Q2KHR2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.77□□□□□ -2.29
RFX7Q2KHR2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RFX7Q2KHR2 RNU6-414P-201ENST00000363705 104 ntBASIC0.77□□□□□ -2.29
RFX7Q2KHR2 RNU6-354P-201ENST00000383862 107 ntBASIC0.77□□□□□ -2.29
RFX7Q2KHR2 RNU6-610P-201ENST00000384264 107 ntBASIC0.77□□□□□ -2.29
RFX7Q2KHR2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
RFX7Q2KHR2 RNU2-48P-201ENST00000410694 191 ntBASIC0.77□□□□□ -2.29
RFX7Q2KHR2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms