Protein–RNA interactions for Protein: Q16143

SNCB, Beta-synuclein, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCBQ16143 AC231657.1-201ENST00000624313 397 ntBASIC0.76□□□□□ -2.29
SNCBQ16143 RNU6-942P-201ENST00000363002 107 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 RNU6-53P-201ENST00000365367 106 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 MIR222-201ENST00000384992 110 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 MIR301A-201ENST00000385261 86 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 RNU11-5P-201ENST00000391216 129 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.75□□□□□ -2.29
SNCBQ16143 RAC1P6-201ENST00000423911 575 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.75□□□□□ -2.29
SNCBQ16143 AL591704.1-201ENST00000432574 275 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 MTCO3P43-201ENST00000440974 771 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AL353752.1-201ENST00000454946 260 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AC022784.5-201ENST00000522241 437 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AC021451.1-201ENST00000523498 1129 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 CBX3P8-201ENST00000532412 525 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.75□□□□□ -2.29
SNCBQ16143 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.75□□□□□ -2.29
SNCBQ16143 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.75□□□□□ -2.29
SNCBQ16143 AC137800.2-201ENST00000574375 120 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 AC112220.2-201ENST00000605513 533 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 OR4G3P-201ENST00000633500 913 ntBASIC0.75□□□□□ -2.29
SNCBQ16143 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.74□□□□□ -2.29
SNCBQ16143 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.74□□□□□ -2.29
SNCBQ16143 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SNCBQ16143 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.74□□□□□ -2.29
SNCBQ16143 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.74□□□□□ -2.29
SNCBQ16143 Y_RNA.534-201ENST00000384599 112 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 RNU6-321P-201ENST00000410912 106 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.74□□□□□ -2.29
SNCBQ16143 UBE2V1P10-201ENST00000414685 269 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SNCBQ16143 AC009518.2-201ENST00000418056 731 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
SNCBQ16143 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.74□□□□□ -2.29
SNCBQ16143 FO393414.1-201ENST00000428697 1184 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.74□□□□□ -2.29
SNCBQ16143 AL606517.1-201ENST00000446914 387 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 RNU6-64P-201ENST00000517119 105 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.74□□□□□ -2.29
SNCBQ16143 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AL512310.8-201ENST00000550183 120 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC104072.1-201ENST00000568817 668 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 MIR3912-201ENST00000577566 105 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AP001004.1-201ENST00000582468 324 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC022022.2-201ENST00000602989 360 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC080078.3-201ENST00000605407 463 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AC090186.1-201ENST00000605991 572 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SNCBQ16143 AC018926.1-201ENST00000616335 435 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 AL589994.2-201ENST00000621124 579 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SNCBQ16143 AC095038.3-201ENST00000634439 195 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 PCMTD1P7-201ENST00000634506 357 ntBASIC0.74□□□□□ -2.29
SNCBQ16143 MTND5P33-201ENST00000571250 1450 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.73□□□□□ -2.29
SNCBQ16143 RNU6-858P-201ENST00000362436 107 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 Y_RNA.338-201ENST00000365320 114 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 RNU6-609P-201ENST00000365459 107 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 Y_RNA.408-201ENST00000383987 102 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
SNCBQ16143 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.73□□□□□ -2.29
SNCBQ16143 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCBQ16143 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCBQ16143 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.73□□□□□ -2.29
SNCBQ16143 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.73□□□□□ -2.29
SNCBQ16143 CALM1P1-201ENST00000442082 433 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 KATNBL1P3-201ENST00000443475 909 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 TPRKBP1-201ENST00000456243 481 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.73□□□□□ -2.29
SNCBQ16143 HMGN1P7-201ENST00000491722 313 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCBQ16143 RNU6-1053P-201ENST00000515930 101 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
SNCBQ16143 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.73□□□□□ -2.29
SNCBQ16143 VN1R87P-201ENST00000596706 487 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 AC004987.4-201ENST00000603383 338 ntBASIC0.73□□□□□ -2.29
SNCBQ16143 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.73□□□□□ -2.29
SNCBQ16143 AC016831.2-201ENST00000417179 352 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.72□□□□□ -2.29
SNCBQ16143 MRPS36P1-201ENST00000421291 307 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.72□□□□□ -2.29
SNCBQ16143 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.72□□□□□ -2.29
SNCBQ16143 RPS15AP10-201ENST00000432472 382 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 HSPE1P9-201ENST00000440046 311 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.72□□□□□ -2.29
SNCBQ16143 HMGN2P9-201ENST00000476875 229 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 HMGB1P30-201ENST00000492455 606 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 AC005840.1-201ENST00000498412 377 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.72□□□□□ -2.29
SNCBQ16143 RNU6-150P-201ENST00000516237 95 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 RNU6-1092P-201ENST00000516955 87 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 RNU6-1315P-201ENST00000517187 99 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.72□□□□□ -2.29
SNCBQ16143 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 AC008088.1-201ENST00000580993 280 ntBASIC0.72□□□□□ -2.29
SNCBQ16143 BNIP3P10-201ENST00000605360 577 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms