Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 ZNF971P-201ENST00000562068 1249 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC090079.2-201ENST00000575289 768 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 NIFKP6-201ENST00000598115 845 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 BNIP3P23-201ENST00000599655 511 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL606834.3-201ENST00000602615 496 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC069304.2-201ENST00000605154 435 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC012467.1-201ENST00000607740 256 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL512427.1-201ENST00000618593 349 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC008443.7-201ENST00000622195 246 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CACNA1EQ15878 SNORD116-20-201ENST00000384529 92 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 MIR329-1-201ENST00000385028 80 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL591034.2-201ENST00000402839 359 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 RNA5SP25-201ENST00000410815 110 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL953862.1-201ENST00000423016 168 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 ELOCP14-201ENST00000428070 331 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 ELOCP7-201ENST00000439968 331 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 CR769776.1-201ENST00000441254 787 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 BTBD7P2-201ENST00000441962 620 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 MTCO3P45-201ENST00000443036 613 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 DDX3P2-201ENST00000446138 111 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 HMGN2P9-201ENST00000476875 229 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC010587.2-201ENST00000511727 448 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 RNU6-840P-201ENST00000517275 65 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 DEFB131D-201ENST00000526803 184 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 MTND3P13-201ENST00000574391 343 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 MTCYBP22-201ENST00000603788 447 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC092574.1-201ENST00000609771 420 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL355472.4-201ENST00000610233 626 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC007792.1-201ENST00000623023 402 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
CACNA1EQ15878 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTCO1P56-201ENST00000401674 224 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU2-3P-201ENST00000410144 191 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 BX119904.4-201ENST00000424402 301 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTCO1P3-201ENST00000429327 192 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTND4P6-201ENST00000438297 472 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC069257.2-201ENST00000441819 155 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC020550.1-201ENST00000447385 163 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTND2P3-201ENST00000452458 470 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-758P-201ENST00000516292 89 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC023632.1-201ENST00000518463 375 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AP006587.4-201ENST00000526053 529 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC122134.1-202ENST00000569111 1201 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 CLIC4P2-201ENST00000601934 717 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL161729.4-201ENST00000604650 476 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC105129.3-201ENST00000605455 485 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC012557.2-201ENST00000605919 418 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MIR8074-201ENST00000615081 81 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL109620.1-201ENST00000618738 1197 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL157770.1-201ENST00000623049 439 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC231657.1-201ENST00000624313 397 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL512506.2-201ENST00000624472 458 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 SNORD115-3-201ENST00000363100 82 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-529P-201ENST00000363383 104 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-944P-201ENST00000364023 107 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 Y_RNA.255-201ENST00000364581 97 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 SNORD114-15-201ENST00000364687 72 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-26P-201ENST00000383985 107 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-1207P-201ENST00000384343 107 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MRPL35P1-201ENST00000404272 572 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTCO3P5-201ENST00000433620 714 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL353706.1-201ENST00000436728 494 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL035666.1-201ENST00000446195 348 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC012308.1-201ENST00000451232 178 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CACNA1EQ15878 TMEM251P1-201ENST00000503717 318 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 MTCO3P27-201ENST00000514397 196 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 RNU6-322P-201ENST00000516010 103 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.43□□□□□ -2.34
CACNA1EQ15878 COPS8P3-201ENST00000526024 482 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AL442163.3-201ENST00000554110 156 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC060771.1-201ENST00000582031 164 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 BNIP3P30-201ENST00000601184 574 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 AC092953.2-201ENST00000608000 699 ntBASIC0.43□□□□□ -2.34
CACNA1EQ15878 Z82243.1-201ENST00000609432 473 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms