Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-237P-201ENST00000515985 71 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXF1Q12946 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.2□□□□□ -2.22
FOXF1Q12946 OR5B19P-201ENST00000531766 928 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 IMMP1LP2-201ENST00000552954 492 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC092325.1-201ENST00000566449 554 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXF1Q12946 AL353778.1-201ENST00000603149 408 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC011458.1-201ENST00000604034 617 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC024933.1-201ENST00000608472 348 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXF1Q12946 AC022202.1-201ENST00000613515 211 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXF1Q12946 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.2□□□□□ -2.22
FOXF1Q12946 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
FOXF1Q12946 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
FOXF1Q12946 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
FOXF1Q12946 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
FOXF1Q12946 RNU1-62P-201ENST00000362599 164 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RNU5F-6P-201ENST00000362979 116 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 SNORD56.2-201ENST00000363242 71 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RNU6-1214P-201ENST00000363650 109 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 SNORD14B-201ENST00000364533 90 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RNU6-622P-201ENST00000384272 103 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 SNORA8-201ENST00000384574 139 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 MIR558-201ENST00000384920 94 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 MIR29C-201ENST00000385231 88 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RNA5SP212-201ENST00000391223 107 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 MIR934-201ENST00000401241 83 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RNU6-387P-201ENST00000411331 105 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RPS15AP12-201ENST00000419498 388 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXF1Q12946 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.19□□□□□ -2.22
FOXF1Q12946 RPS24P1-201ENST00000438550 371 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL606517.1-201ENST00000446914 387 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL137159.1-201ENST00000452808 512 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXF1Q12946 AL583843.1-201ENST00000456070 346 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 HMGB1P30-201ENST00000492455 606 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.19□□□□□ -2.22
FOXF1Q12946 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.19□□□□□ -2.22
FOXF1Q12946 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.19□□□□□ -2.22
FOXF1Q12946 Y_RNA.689-201ENST00000516589 107 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXF1Q12946 AP005597.4-201ENST00000526762 229 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC087441.2-201ENST00000529141 262 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.19□□□□□ -2.22
FOXF1Q12946 MIR5697-201ENST00000578045 78 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC073410.2-201ENST00000603240 332 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC021646.1-201ENST00000605469 484 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL139286.2-201ENST00000606838 396 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC012409.4-201ENST00000612923 249 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC009878.1-201ENST00000621819 340 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AC024940.5-201ENST00000622889 474 ntBASIC1.19□□□□□ -2.22
FOXF1Q12946 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.19□□□□□ -2.22
FOXF1Q12946 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
FOXF1Q12946 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.18□□□□□ -2.22
FOXF1Q12946 RBBP8P1-201ENST00000449447 1844 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 OR4G2P-201ENST00000328113 903 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 CISD1P1-201ENST00000393907 327 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 RNA5SP390-201ENST00000410191 113 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AL031779.1-201ENST00000415663 330 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC016831.2-201ENST00000417179 352 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC008267.5-201ENST00000424928 265 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXF1Q12946 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 MTND5P2-201ENST00000442927 1142 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AL590365.1-201ENST00000450788 243 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 RNU1-98P-201ENST00000458992 160 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.18□□□□□ -2.22
FOXF1Q12946 MTND1P22-201ENST00000510572 951 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC112206.3-201ENST00000514578 389 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 RN7SKP256-201ENST00000517201 314 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC022878.1-201ENST00000530684 149 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC018630.3-201ENST00000542637 96 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 ELOCP32-201ENST00000548625 324 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 MIR548AC-201ENST00000585049 88 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.18□□□□□ -2.22
FOXF1Q12946 AC004223.4-201ENST00000612426 332 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 AC007671.2-201ENST00000637344 619 ntBASIC1.18□□□□□ -2.22
FOXF1Q12946 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
FOXF1Q12946 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
FOXF1Q12946 FARSBP1-201ENST00000435808 1778 ntBASIC1.17□□□□□ -2.22
FOXF1Q12946 MIR186-201ENST00000384988 86 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms