Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC025165.5-201ENST00000602802 578 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 AC025449.1-201ENST00000603896 529 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 AC007792.1-201ENST00000623023 402 ntBASIC1.9□□□□□ -2.11
RAB40BQ12829 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40BQ12829 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RAB40BQ12829 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40BQ12829 AC002543.1-201ENST00000299783 1954 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 Y_RNA.40-201ENST00000362645 93 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 RNU6-527P-201ENST00000363425 104 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 RNU6-1210P-201ENST00000363775 107 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 SNORA25B-201ENST00000365507 128 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 SNORA75-201ENST00000384158 137 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 BTF3P7-201ENST00000407097 488 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 MTATP6P18-201ENST00000417994 673 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.89□□□□□ -2.11
RAB40BQ12829 SRIP2-201ENST00000428470 166 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AL591043.1-201ENST00000432461 424 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 USP9YP8-201ENST00000441913 500 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AC079382.1-201ENST00000493346 557 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 LRRC34P2-201ENST00000514850 553 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40BQ12829 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40BQ12829 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.89□□□□□ -2.11
RAB40BQ12829 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.89□□□□□ -2.11
RAB40BQ12829 AC119751.7-201ENST00000600494 245 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AC025811.1-201ENST00000604312 472 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AC091834.1-201ENST00000614543 472 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 Z69720.2-201ENST00000624755 279 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 AC243829.7-201ENST00000633081 225 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 IGHVIII-44-202ENST00000636235 289 ntBASIC1.89□□□□□ -2.11
RAB40BQ12829 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40BQ12829 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40BQ12829 ZNF680P1-201ENST00000436625 1469 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RAB40BQ12829 MIR449A-201ENST00000362113 91 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-37P-201ENST00000362692 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 Y_RNA.77-201ENST00000362962 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-1120P-201ENST00000362988 108 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-11P-201ENST00000364234 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-25P-201ENST00000383873 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-1-201ENST00000383898 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-48P-201ENST00000384161 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-36P-201ENST00000384172 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-4P-201ENST00000384205 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-5P-201ENST00000384238 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-3P-201ENST00000384314 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-16P-201ENST00000384385 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-393P-201ENST00000384475 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-15P-201ENST00000384534 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-2-201ENST00000384627 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-29P-201ENST00000384637 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 Y_RNA.553-201ENST00000384670 102 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-9-201ENST00000384776 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-33P-201ENST00000384793 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 SNORD70.1-201ENST00000391007 85 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 AL445529.1-201ENST00000398713 389 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 BTF3L4P1-201ENST00000413813 468 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.88□□□□□ -2.11
RAB40BQ12829 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40BQ12829 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB40BQ12829 snoU13.14-201ENST00000459372 104 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 GMFBP1-201ENST00000467831 427 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40BQ12829 MTCO3P7-201ENST00000510008 774 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RAB40BQ12829 AC010493.1-201ENST00000513479 292 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB40BQ12829 AL356057.1-201ENST00000533798 831 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 OR11H5P-201ENST00000554039 926 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 MIR4435-1-201ENST00000582552 80 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.88□□□□□ -2.11
RAB40BQ12829 AC073648.5-201ENST00000603502 305 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 RNU6-6P-201ENST00000606623 107 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RAB40BQ12829 AC097372.5-201ENST00000623665 376 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 AC022418.1-201ENST00000624118 445 ntBASIC1.88□□□□□ -2.11
RAB40BQ12829 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40BQ12829 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
RAB40BQ12829 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AC009487.4-201ENST00000624969 3585 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 RNU6-434P-201ENST00000384376 107 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40BQ12829 MTCO1P19-201ENST00000443487 500 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 PRPS1P1-201ENST00000445305 876 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.87□□□□□ -2.11
RAB40BQ12829 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AC018868.1-201ENST00000491307 315 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.87□□□□□ -2.11
RAB40BQ12829 AC010424.1-201ENST00000506336 297 ntBASIC1.87□□□□□ -2.11
RAB40BQ12829 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.87□□□□□ -2.11
RAB40BQ12829 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms