Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL162730.1-201ENST00000605734 292 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 MIR3529-201ENST00000637713 78 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AC233263.6-201ENST00000631132 1963 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSRP1Q08945 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SSRP1Q08945 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSRP1Q08945 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSRP1Q08945 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SSRP1Q08945 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
SSRP1Q08945 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSRP1Q08945 SNORD56.1-201ENST00000362913 68 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 RNU6-595P-201ENST00000363944 107 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 SNORD46.1-201ENST00000364139 104 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 RNU6-99P-201ENST00000364721 107 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 SNORD6-201ENST00000365444 73 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AP002088.1-201ENST00000382740 395 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 MIR449B-201ENST00000384995 97 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 MRPL42P3-201ENST00000401492 326 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.89□□□□□ -1.79
SSRP1Q08945 MRPS18CP6-201ENST00000423587 223 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AC017083.1-201ENST00000428093 483 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.89□□□□□ -1.79
SSRP1Q08945 HMGN2P20-201ENST00000437531 273 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AC243964.1-201ENST00000441814 261 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AC079354.2-201ENST00000453523 154 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.89□□□□□ -1.79
SSRP1Q08945 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.89□□□□□ -1.79
SSRP1Q08945 AC010401.1-201ENST00000463867 348 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.89□□□□□ -1.79
SSRP1Q08945 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.89□□□□□ -1.79
SSRP1Q08945 AC019159.1-201ENST00000605094 187 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.89□□□□□ -1.79
SSRP1Q08945 U7.8-201ENST00000619968 63 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.89□□□□□ -1.79
SSRP1Q08945 MTND4P1-201ENST00000457501 1466 ntBASIC3.89□□□□□ -1.79
SSRP1Q08945 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSRP1Q08945 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SSRP1Q08945 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
SSRP1Q08945 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.88□□□□□ -1.79
SSRP1Q08945 AC007256.1-201ENST00000392253 2765 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SSRP1Q08945 AC004944.1-201ENST00000517807 3059 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 HAUS6P2-201ENST00000433254 2404 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 Y_RNA.158-201ENST00000363651 101 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.88□□□□□ -1.79
SSRP1Q08945 MIR490-201ENST00000384865 128 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 YME1L1P1-201ENST00000429435 297 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 AC012308.1-201ENST00000451232 178 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 RN7SL293P-201ENST00000481765 281 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 AC093663.1-201ENST00000497190 394 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.88□□□□□ -1.79
SSRP1Q08945 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.88□□□□□ -1.79
SSRP1Q08945 SNORD19.2-201ENST00000516978 73 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSRP1Q08945 AC092447.9-201ENST00000603395 144 ntBASIC3.88□□□□□ -1.79
SSRP1Q08945 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSRP1Q08945 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSRP1Q08945 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSRP1Q08945 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
SSRP1Q08945 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.88□□□□□ -1.79
SSRP1Q08945 AL049781.1-201ENST00000623195 3585 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SSRP1Q08945 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.87□□□□□ -1.79
SSRP1Q08945 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSRP1Q08945 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSRP1Q08945 Y_RNA.333-201ENST00000365274 102 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AL138885.1-201ENST00000405921 675 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AL159169.1-201ENST00000421119 127 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AL160004.2-201ENST00000432935 350 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 BX679664.1-201ENST00000434429 253 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC007969.2-201ENST00000441891 191 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 CYCSP35-201ENST00000451978 304 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
SSRP1Q08945 AC097462.2-201ENST00000504623 481 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC105758.1-201ENST00000506038 399 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.87□□□□□ -1.79
SSRP1Q08945 RNU5F-8P-201ENST00000515941 111 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 SNORA31.21-201ENST00000517180 77 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 SNORA31.23-201ENST00000517219 133 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.87□□□□□ -1.79
SSRP1Q08945 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.87□□□□□ -1.79
SSRP1Q08945 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.87□□□□□ -1.79
SSRP1Q08945 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.87□□□□□ -1.79
SSRP1Q08945 AC069200.1-201ENST00000609511 323 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC009541.1-201ENST00000438279 2662 ntBASIC3.87□□□□□ -1.79
SSRP1Q08945 AC007496.3-201ENST00000624987 3443 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSRP1Q08945 Y_RNA.314-201ENST00000365114 102 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 RNU6-843P-201ENST00000384454 104 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SSRP1Q08945 RNU6-1156P-201ENST00000410365 100 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 RNU2-49P-201ENST00000410666 184 ntBASIC3.86□□□□□ -1.79
SSRP1Q08945 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms