Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PCDH1Q08174 FAM35BP-202ENST00000497389 3337 ntBASIC4.14□□□□□ -1.75
PCDH1Q08174 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PCDH1Q08174 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDH1Q08174 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 RNU6-873P-201ENST00000363833 107 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 RNA5SP515-201ENST00000364570 118 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
PCDH1Q08174 RNU6-213P-201ENST00000384051 104 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 RNA5SP129-201ENST00000410276 118 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 Y_RNA.595-201ENST00000410403 105 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AC138623.1-201ENST00000418060 216 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH1Q08174 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH1Q08174 AC011998.1-201ENST00000433403 117 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 UQCRBP2-201ENST00000447827 297 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AP000873.1-201ENST00000463987 400 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDH1Q08174 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDH1Q08174 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDH1Q08174 MRPS18CP4-201ENST00000535821 231 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH1Q08174 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 MIR5096-201ENST00000583713 70 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AL078605.1-201ENST00000603529 500 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AC008745.1-201ENST00000604064 271 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AC022441.3-201ENST00000605737 136 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDH1Q08174 AC010999.1-201ENST00000611856 324 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 MIR7702-201ENST00000621931 59 ntBASIC4.13□□□□□ -1.75
PCDH1Q08174 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDH1Q08174 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDH1Q08174 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDH1Q08174 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH1Q08174 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH1Q08174 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH1Q08174 RNU6-804P-201ENST00000384286 107 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 RPS26P42-201ENST00000413485 326 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDH1Q08174 AC244670.1-201ENST00000436879 112 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 RPL23AP52-201ENST00000439311 478 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AC005042.3-201ENST00000453230 174 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AL645939.1-201ENST00000453429 797 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AP000705.1-201ENST00000454567 350 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 RNU6-581P-201ENST00000516214 105 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 RNU6-346P-201ENST00000516288 111 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 RNY3P16-201ENST00000516338 101 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 TRAV8-5-201ENST00000537369 341 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 TOMM20P2-201ENST00000540082 421 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 NACAP3-201ENST00000552100 481 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 MIR3144-201ENST00000579460 79 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AC004832.4-201ENST00000608952 331 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AC048347.1-201ENST00000624621 427 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 MIR3529-201ENST00000637713 78 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDH1Q08174 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDH1Q08174 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDH1Q08174 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDH1Q08174 AL109809.4-201ENST00000603520 2185 ntBASIC4.12□□□□□ -1.75
PCDH1Q08174 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDH1Q08174 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDH1Q08174 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PCDH1Q08174 RNA5SP447-201ENST00000363749 119 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 RNU5F-3P-201ENST00000363767 117 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 RNU6-704P-201ENST00000364162 103 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 Y_RNA.308-201ENST00000365043 101 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 Y_RNA.435-201ENST00000384095 112 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 SNORA26.3-201ENST00000391119 136 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 Y_RNA.597-201ENST00000410463 100 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 RPS29P17-201ENST00000430795 166 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC091390.1-201ENST00000433904 331 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC112220.1-201ENST00000434628 355 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC012308.1-201ENST00000451232 178 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC146944.2-203ENST00000502493 354 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC139495.1-202ENST00000513164 354 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 MTND5P41-201ENST00000517498 206 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AP005660.1-201ENST00000522972 293 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH1Q08174 AC233702.2-202ENST00000562547 291 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDH1Q08174 AL356218.2-201ENST00000605264 187 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms