Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CKAP4Q07065 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.05□□□□□ -2.08
CKAP4Q07065 SCARNA17.1-201ENST00000516211 143 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 SCARNA17.2-201ENST00000516334 143 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-358P-201ENST00000516564 75 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 RNA5SP291-201ENST00000517222 105 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AP003122.3-201ENST00000526316 255 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC084851.1-201ENST00000529105 249 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 BNIP3P9-201ENST00000603714 553 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 SCARNA17.4-201ENST00000614296 143 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AL449363.1-201ENST00000617815 186 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 AC024614.3-201ENST00000637860 256 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CKAP4Q07065 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKAP4Q07065 RNU6-371P-201ENST00000364283 108 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 Y_RNA.245-201ENST00000364493 95 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 SNORA4.3-201ENST00000365564 137 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 RNU4-20P-201ENST00000365601 151 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 CISD1P1-201ENST00000393907 327 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 RNA5SP118-201ENST00000410385 109 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 BTF3L4P3-201ENST00000418879 476 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.04□□□□□ -2.08
CKAP4Q07065 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.04□□□□□ -2.08
CKAP4Q07065 MTND5P6-201ENST00000422338 1798 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CKAP4Q07065 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.04□□□□□ -2.08
CKAP4Q07065 AC007919.1-201ENST00000429380 217 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AL592045.1-201ENST00000429867 352 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.04□□□□□ -2.08
CKAP4Q07065 HMGB1P31-201ENST00000437242 427 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 CYCSP32-201ENST00000440548 321 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 SNRPFP3-201ENST00000457792 225 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 RPL31P58-201ENST00000469001 379 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC116353.2-201ENST00000505332 712 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC091885.1-201ENST00000506658 268 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 PRDX4P1-201ENST00000507189 574 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.04□□□□□ -2.08
CKAP4Q07065 RNA5SP290-201ENST00000517133 127 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKAP4Q07065 AC022634.1-201ENST00000520765 532 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AL137161.1-201ENST00000532231 390 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AL138889.2-201ENST00000603883 242 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC012493.3-201ENST00000604494 112 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.04□□□□□ -2.08
CKAP4Q07065 AC004520.1-201ENST00000608362 1413 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC006386.2-201ENST00000624491 75 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 AC012005.1-201ENST00000624575 75 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.04□□□□□ -2.08
CKAP4Q07065 Z99571.1-201ENST00000636677 394 ntBASIC2.04□□□□□ -2.08
CKAP4Q07065 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CKAP4Q07065 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKAP4Q07065 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 Y_RNA.88-201ENST00000363029 99 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKAP4Q07065 Y_RNA.390-201ENST00000383932 102 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 RNU6-38P-201ENST00000384085 107 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 RNU6-1127P-201ENST00000384580 107 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 SNORD23.1-201ENST00000408212 104 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 EIF1AXP1-201ENST00000419267 435 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 RPL30P16-201ENST00000419341 429 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AL669831.1-202ENST00000428504 417 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 GTF2IP13-201ENST00000438487 386 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MTND3P16-201ENST00000452205 344 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 RNU6-333P-201ENST00000459117 107 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.03□□□□□ -2.08
CKAP4Q07065 RNU6-1315P-201ENST00000517187 99 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 SNORA70.24-201ENST00000517233 118 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AC118273.2-201ENST00000532092 465 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 MTCO3P23-201ENST00000561363 289 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AC060780.3-201ENST00000589464 80 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AC010525.2-201ENST00000590920 195 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AL670379.4-201ENST00000605279 254 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AL158032.1-201ENST00000605401 106 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MIR6798-201ENST00000612887 67 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CKAP4Q07065 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP4Q07065 AL031601.2-202ENST00000622650 282 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 MIR3662-201ENST00000637030 95 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 AC080128.1-201ENST00000474389 1917 ntBASIC2.03□□□□□ -2.08
CKAP4Q07065 OR4G1P-203ENST00000641984 1631 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms