| PAX8 | Q06710 | AC090115.4-201 | ENST00000609970 | 188 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL359697.1-201 | ENST00000624879 | 587 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | NOX4-202 | ENST00000343727 | 3347 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ZCCHC10-201 | ENST00000324170 | 2178 nt | APPRIS P3 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | GSTA3-201 | ENST00000211122 | 902 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-37P-201 | ENST00000362692 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.61-201 | ENST00000362835 | 102 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-11P-201 | ENST00000364234 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.339-201 | ENST00000365325 | 102 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-25P-201 | ENST00000383873 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SNORD116-11-201 | ENST00000383882 | 92 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-1-201 | ENST00000383898 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-48P-201 | ENST00000384161 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-36P-201 | ENST00000384172 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-4P-201 | ENST00000384205 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-5P-201 | ENST00000384238 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-3P-201 | ENST00000384314 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.474-201 | ENST00000384341 | 102 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-16P-201 | ENST00000384385 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-15P-201 | ENST00000384534 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-2-201 | ENST00000384627 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-29P-201 | ENST00000384637 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-9-201 | ENST00000384776 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-33P-201 | ENST00000384793 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR887-201 | ENST00000401258 | 79 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL138827.1-201 | ENST00000402666 | 306 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC016831.2-201 | ENST00000417179 | 352 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SAR1AP4-201 | ENST00000429225 | 591 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RAB6C-AS1-202 | ENST00000433431 | 123 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC092573.2-202 | ENST00000437243 | 336 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL714022.1-201 | ENST00000439897 | 151 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC00393-201 | ENST00000443621 | 282 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC01077-201 | ENST00000452288 | 413 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MTND4P17-201 | ENST00000470444 | 350 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC008526.1-201 | ENST00000509149 | 338 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNA5SP454-201 | ENST00000517231 | 127 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC087854.1-201 | ENST00000519706 | 414 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AP005639.2-201 | ENST00000527592 | 928 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC124657.1-201 | ENST00000527819 | 429 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC093027.1-201 | ENST00000546698 | 429 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL359237.1-201 | ENST00000554305 | 826 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | TTN-AS1-212 | ENST00000582847 | 1036 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | HMGN2P15-201 | ENST00000585707 | 270 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC087045.1-201 | ENST00000605856 | 382 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-6P-201 | ENST00000606623 | 107 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | UBE2E2-206 | ENST00000613545 | 282 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL359314.1-201 | ENST00000616913 | 261 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Z69720.2-201 | ENST00000624755 | 279 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SYTL2-230 | ENST00000634661 | 6672 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ZNF680-202 | ENST00000447137 | 2159 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC092593.1-201 | ENST00000515413 | 1815 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ZNF519P1-201 | ENST00000449011 | 1626 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | IL33-201 | ENST00000381434 | 2641 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | FOXP2-210 | ENST00000403559 | 6415 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-898P-201 | ENST00000365627 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | DEFB125-201 | ENST00000382410 | 587 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-198P-201 | ENST00000384258 | 104 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.509-201 | ENST00000384506 | 99 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MT-TD-201 | ENST00000387419 | 68 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AP003170.3-201 | ENST00000399123 | 158 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR548K-201 | ENST00000408406 | 116 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR548F5-201 | ENST00000408421 | 86 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNA5SP21-201 | ENST00000410917 | 96 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL096701.2-201 | ENST00000416920 | 238 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL160162.1-202 | ENST00000417654 | 244 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC093911.1-201 | ENST00000419129 | 552 nt | TSL 4 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | BPY2DP-201 | ENST00000422208 | 265 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL590632.1-201 | ENST00000424289 | 371 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL513043.1-201 | ENST00000439124 | 535 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL445524.1-202 | ENST00000440665 | 416 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC02264-201 | ENST00000442020 | 576 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL359672.1-201 | ENST00000442302 | 409 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC108938.1-201 | ENST00000451204 | 136 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL365295.1-201 | ENST00000454942 | 514 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SNORD109B-201 | ENST00000458961 | 67 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SNORD109A-201 | ENST00000459128 | 67 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC02491-201 | ENST00000504710 | 403 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC079140.5-201 | ENST00000507882 | 310 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC02269-201 | ENST00000509968 | 511 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC092436.3-201 | ENST00000511788 | 257 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPL23AP94-201 | ENST00000512518 | 302 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC097467.1-201 | ENST00000513660 | 370 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.687-201 | ENST00000516558 | 91 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC069113.1-201 | ENST00000517763 | 267 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC139497.1-201 | ENST00000524042 | 501 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC00933-203 | ENST00000559812 | 219 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC090772.1-201 | ENST00000583782 | 507 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC078899.3-201 | ENST00000599065 | 212 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL627309.6-201 | ENST00000606857 | 840 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | NOC3L-201 | ENST00000371361 | 3455 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |