Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 PTGES3P1-201ENST00000439531 483 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.35□□□□□ -2.35
TOP2BQ02880 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TOP2BQ02880 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.35□□□□□ -2.35
TOP2BQ02880 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.35□□□□□ -2.35
TOP2BQ02880 BNIP3P16-201ENST00000589779 534 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AL020997.3-201ENST00000602843 359 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AL583856.2-201ENST00000606298 543 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 RNU6-91P-201ENST00000607774 107 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.35□□□□□ -2.35
TOP2BQ02880 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TOP2BQ02880 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.35□□□□□ -2.35
TOP2BQ02880 AL161935.2-201ENST00000414627 60 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.35□□□□□ -2.35
TOP2BQ02880 ELOCP14-201ENST00000428070 331 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 ELOCP7-201ENST00000439968 331 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 MTCO3P17-201ENST00000443775 513 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 ARL2BPP5-201ENST00000523141 481 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AL159972.1-201ENST00000625150 448 ntBASIC0.35□□□□□ -2.35
TOP2BQ02880 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
TOP2BQ02880 SNORD95.1-201ENST00000364099 68 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 Y_RNA.255-201ENST00000364581 97 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 MIR525-201ENST00000384978 85 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
TOP2BQ02880 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.34□□□□□ -2.36
TOP2BQ02880 AC010631.1-201ENST00000474150 156 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 CYCTP-201ENST00000504253 315 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 RNU6-528P-201ENST00000516926 100 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 RNU6-703P-201ENST00000516946 107 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 RNU6-586P-201ENST00000517265 104 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 MIR4493-201ENST00000584016 73 ntBASIC0.34□□□□□ -2.36
TOP2BQ02880 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.34□□□□□ -2.36
TOP2BQ02880 RNU4-73P-201ENST00000363164 141 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 SNORA4.1-201ENST00000364263 144 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 RNU6-546P-201ENST00000383991 107 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TOP2BQ02880 RPS3AP36-201ENST00000398190 775 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 C8orf59P1-201ENST00000429930 303 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 UBE2V1P8-201ENST00000437166 265 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 GTF2IP13-201ENST00000438487 386 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.33□□□□□ -2.36
TOP2BQ02880 RPL31P3-201ENST00000458430 332 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.33□□□□□ -2.36
TOP2BQ02880 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AC109329.1-201ENST00000518744 317 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.33□□□□□ -2.36
TOP2BQ02880 RSL24D1P11-201ENST00000591045 491 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AC104820.1-201ENST00000624183 307 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AC017037.3-201ENST00000625016 472 ntBASIC0.33□□□□□ -2.36
TOP2BQ02880 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.33□□□□□ -2.36
TOP2BQ02880 SNORD114-24-201ENST00000365029 72 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 PNRC2P1-201ENST00000423940 420 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 AC118282.2-201ENST00000508739 374 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 AC112206.3-201ENST00000514578 389 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 RNU6-581P-201ENST00000516214 105 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.32□□□□□ -2.36
TOP2BQ02880 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.32□□□□□ -2.36
TOP2BQ02880 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.32□□□□□ -2.36
TOP2BQ02880 AC008088.1-201ENST00000580993 280 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
TOP2BQ02880 AP003465.2-201ENST00000602571 373 ntBASIC0.32□□□□□ -2.36
TOP2BQ02880 RNU6-112P-201ENST00000363599 104 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 RNU6-878P-201ENST00000384578 110 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.31□□□□□ -2.36
TOP2BQ02880 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.31□□□□□ -2.36
TOP2BQ02880 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.31□□□□□ -2.36
TOP2BQ02880 AC007834.2-201ENST00000536310 343 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AP001180.6-201ENST00000584918 159 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.31□□□□□ -2.36
TOP2BQ02880 AP000860.1-201ENST00000605250 559 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AL357075.2-201ENST00000614906 189 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC240442.1-201ENST00000616055 283 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
TOP2BQ02880 SNORA9.1-201ENST00000362412 131 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 Y_RNA.552-201ENST00000384665 112 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 TIMM9P1-201ENST00000436122 256 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 OR2AQ1P-201ENST00000451972 200 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.31□□□□□ -2.36
TOP2BQ02880 RNU6-197P-201ENST00000516680 100 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 RNA5SP290-201ENST00000517133 127 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
TOP2BQ02880 AL512310.8-201ENST00000550183 120 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 AC022432.1-201ENST00000595739 310 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 RPL30P11-203ENST00000598995 310 ntBASIC0.31□□□□□ -2.36
TOP2BQ02880 MTCO1P18-201ENST00000455518 1419 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 RNU6-673P-201ENST00000365084 104 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 Y_RNA.610-201ENST00000410681 103 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 AL353621.1-201ENST00000418219 243 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 AC092634.6-201ENST00000418558 192 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.3□□□□□ -2.36
TOP2BQ02880 AC002381.1-201ENST00000447049 280 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.3□□□□□ -2.36
TOP2BQ02880 SNORA3.4-201ENST00000515969 96 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.3□□□□□ -2.36
TOP2BQ02880 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.3□□□□□ -2.36
TOP2BQ02880 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
TOP2BQ02880 MIR4768-201ENST00000585270 74 ntBASIC0.3□□□□□ -2.36
TOP2BQ02880 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms