Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-843P-201ENST00000384454 104 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 MIR548B-201ENST00000385247 97 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC010099.3-201ENST00000423896 409 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AL591043.1-201ENST00000432461 424 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 MTCYBP15-201ENST00000433123 1127 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 MTND1P16-201ENST00000465177 898 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 RPS27P22-201ENST00000478056 241 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 SNORA31.3-201ENST00000516029 96 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 RNU6-572P-201ENST00000516724 80 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 SNORD60.2-201ENST00000516883 86 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 SNORA70.22-201ENST00000517160 124 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC004812.1-201ENST00000540773 146 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 FAM106DP-201ENST00000586416 501 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC105129.3-201ENST00000605455 485 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AL365434.2-201ENST00000607979 234 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC040896.1-201ENST00000613819 479 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC083806.3-201ENST00000614016 455 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC130324.3-201ENST00000614165 542 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 AC010975.3-201ENST00000618727 978 ntBASIC0.45□□□□□ -2.34
HIST1H1AQ02539 RNU1-93P-201ENST00000364704 169 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 RNU6-343P-201ENST00000364709 104 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC012308.1-201ENST00000451232 178 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC097473.1-201ENST00000508142 408 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 RNU5A-4P-201ENST00000516588 111 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 RNA5SP384-201ENST00000516615 116 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 RNA5SP437-201ENST00000517249 129 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC090142.3-201ENST00000519012 385 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC009902.1-201ENST00000519351 183 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 CYP3A137P-201ENST00000562436 69 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 BNIP3P30-201ENST00000601184 574 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC022022.2-201ENST00000602989 360 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 RMST_4.1-201ENST00000616886 107 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC120349.3-201ENST00000624377 529 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 AC120349.2-201ENST00000625002 298 ntBASIC0.44□□□□□ -2.34
HIST1H1AQ02539 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
HIST1H1AQ02539 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 RNU6-858P-201ENST00000362436 107 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 MIR194-1-201ENST00000384892 85 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AL357139.1-201ENST00000407792 426 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 RNU2-7P-201ENST00000410794 178 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 RPL21P24-201ENST00000413752 448 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 MTND4P6-201ENST00000438297 472 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 MIR4781-201ENST00000585250 76 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AC107304.1-201ENST00000604229 296 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 AP000654.2-201ENST00000605633 586 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.43□□□□□ -2.34
HIST1H1AQ02539 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H1AQ02539 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 RNU6-707P-201ENST00000364647 95 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 MIR200A-201ENST00000384875 90 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 RNU2-23P-201ENST00000410545 195 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 RPS26P5-201ENST00000418544 335 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 COX6CP6-201ENST00000490840 228 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 SNORA76.2-201ENST00000517095 137 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC023632.1-201ENST00000518463 375 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AP003484.1-201ENST00000530974 250 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC136443.5-201ENST00000603741 370 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC069114.2-201ENST00000604699 304 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC090578.1-201ENST00000604955 591 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC092656.1-203ENST00000624134 423 ntBASIC0.42□□□□□ -2.34
HIST1H1AQ02539 AC068647.2-201ENST00000637380 353 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms