Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC023050.2-201ENST00000544968 387 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 RPL30P11-203ENST00000598995 310 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 CLIC4P2-201ENST00000601934 717 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC242628.1-201ENST00000606810 391 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AL133445.2-201ENST00000611191 527 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC087588.2-201ENST00000617667 426 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 uc_338.22-201ENST00000622722 187 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN7AQ01118 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
SCN7AQ01118 AC092447.10-201ENST00000620607 1652 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 RNA5SP493-201ENST00000364115 91 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 SNORA4.1-201ENST00000364263 144 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 MTCO1P3-201ENST00000429327 192 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 GAPDHP17-201ENST00000449858 1001 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
SCN7AQ01118 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.26□□□□□ -2.37
SCN7AQ01118 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.26□□□□□ -2.37
SCN7AQ01118 ZNF849P-201ENST00000594711 1566 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 AC022432.1-201ENST00000595739 310 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 AC138627.2-201ENST00000624202 601 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.26□□□□□ -2.37
SCN7AQ01118 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SCN7AQ01118 MIR338-201ENST00000636369 67 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 AC245060.5-201ENST00000610778 3293 ntBASIC0.26□□□□□ -2.37
SCN7AQ01118 RNU6-819P-201ENST00000364116 107 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 RNU6-160P-201ENST00000384591 107 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AL353621.1-201ENST00000418219 243 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 Z95118.1-201ENST00000421372 247 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN7AQ01118 AL358794.1-201ENST00000445689 381 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 RN7SKP88-201ENST00000516847 250 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AP001893.2-201ENST00000526949 202 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.25□□□□□ -2.37
SCN7AQ01118 Z83818.1-201ENST00000603584 150 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AC090578.1-201ENST00000604955 591 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AC034229.4-201ENST00000607861 441 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 Z82243.1-201ENST00000609432 473 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 7SK.8-201ENST00000612110 250 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 7SK.11-201ENST00000615477 250 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 7SK.13-201ENST00000622040 250 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AC004009.2-201ENST00000623016 728 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 AC093648.1-201ENST00000623546 606 ntBASIC0.25□□□□□ -2.37
SCN7AQ01118 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN7AQ01118 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SCN7AQ01118 SNORD114-6-201ENST00000364393 72 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 MIR1265-201ENST00000408444 86 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 OR2AQ1P-201ENST00000451972 200 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 MTND3P4-201ENST00000453537 303 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 RNU6-1092P-201ENST00000516955 87 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN7AQ01118 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN7AQ01118 AP000860.1-201ENST00000605250 559 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AL158211.4-201ENST00000606988 584 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 MIR6134-201ENST00000617606 109 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AC009950.2-201ENST00000636548 183 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AL590396.4-201ENST00000636779 956 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SCN7AQ01118 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SCN7AQ01118 Y_RNA.60-201ENST00000362831 98 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 SNORD18A-201ENST00000363753 72 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 RNU6-105P-201ENST00000363909 104 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AC092634.6-201ENST00000418558 192 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN7AQ01118 PNRC2P1-201ENST00000423940 420 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AC105758.1-201ENST00000506038 399 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 RNU6-197P-201ENST00000516680 100 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.24□□□□□ -2.37
SCN7AQ01118 MRPS36P5-201ENST00000551909 298 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AL357094.1-201ENST00000603845 844 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 AL627230.5-201ENST00000619807 58 ntBASIC0.24□□□□□ -2.37
SCN7AQ01118 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.23□□□□□ -2.37
SCN7AQ01118 MIR194-1-201ENST00000384892 85 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 RNU6-1054P-201ENST00000411293 104 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 RPL21P24-201ENST00000413752 448 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN7AQ01118 AC244505.3-201ENST00000454598 187 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN7AQ01118 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.23□□□□□ -2.37
SCN7AQ01118 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.23□□□□□ -2.37
SCN7AQ01118 MIR3664-201ENST00000579074 99 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 AC008088.1-201ENST00000580993 280 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 BNIP3P24-201ENST00000593398 557 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 AC104820.1-201ENST00000624183 307 ntBASIC0.23□□□□□ -2.37
SCN7AQ01118 Y_RNA.99-201ENST00000363138 105 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 RNU6-439P-201ENST00000384188 106 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.22□□□□□ -2.37
SCN7AQ01118 MTCYBP40-201ENST00000509390 1135 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 AC121161.1-201ENST00000510606 652 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 AC024060.1-201ENST00000607052 494 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.22□□□□□ -2.37
SCN7AQ01118 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.22□□□□□ -2.37
SCN7AQ01118 FARSBP1-201ENST00000435808 1778 ntBASIC0.22□□□□□ -2.37
SCN7AQ01118 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.21□□□□□ -2.38
SCN7AQ01118 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SCN7AQ01118 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.21□□□□□ -2.38
SCN7AQ01118 RNU2-7P-201ENST00000410794 178 ntBASIC0.21□□□□□ -2.38
SCN7AQ01118 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms