Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-767P-201ENST00000384132 107 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RNU6-1013P-201ENST00000384180 107 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RNU6-692P-201ENST00000384496 107 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RNU6-293P-201ENST00000411259 106 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 MTND3P8-201ENST00000412909 339 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CL1P78423 AL590632.1-201ENST00000424289 371 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RPL35AP12-201ENST00000425362 338 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 MICF-203ENST00000432679 129 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 MTND4LP16-201ENST00000440828 295 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC243964.1-201ENST00000441814 261 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 PMCHL2-203ENST00000457791 237 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC008885.1-201ENST00000514930 301 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 RNA5SP112-201ENST00000515937 99 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC026241.1-201ENST00000517873 2142 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CL1P78423 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CL1P78423 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.4□□□□□ -2.03
CX3CL1P78423 AC026464.5-201ENST00000562497 722 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.4□□□□□ -2.03
CX3CL1P78423 MIR3199-1-201ENST00000582434 88 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 MIR5195-201ENST00000583555 115 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CL1P78423 VN1R107P-201ENST00000601784 209 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AL160281.1-201ENST00000605307 311 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC096772.1-201ENST00000609146 564 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC024581.2-201ENST00000619986 252 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC005858.4-201ENST00000623191 700 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC244517.12-201ENST00000623581 663 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 MIR6733-201ENST00000635723 61 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC241585.2-209ENST00000638217 143 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CL1P78423 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.4□□□□□ -2.03
CX3CL1P78423 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 AC073346.2-201ENST00000624724 2058 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CX3CL1P78423 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CL1P78423 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.39□□□□□ -2.03
CX3CL1P78423 MTND4P23-201ENST00000447723 1363 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC073325.2-201ENST00000339545 159 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 MIR208A-201ENST00000362287 71 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-562P-201ENST00000362731 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-1010P-201ENST00000362757 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 Y_RNA.88-201ENST00000363029 99 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 SNORD114-19-201ENST00000363072 75 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-486P-201ENST00000363116 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 SNORA71.1-201ENST00000364523 117 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 SNORD116-11-201ENST00000383882 92 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-95P-201ENST00000384697 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-1106P-201ENST00000390845 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNA5SP390-201ENST00000410191 113 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-1245P-201ENST00000411130 106 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC138623.1-201ENST00000418060 216 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC097463.2-201ENST00000421074 142 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RPL30P4-201ENST00000429309 333 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 SNAP23P1-201ENST00000433229 246 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.39□□□□□ -2.03
CX3CL1P78423 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RPL39P40-201ENST00000445481 146 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 UBBP3-201ENST00000445497 241 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AMD1P1-201ENST00000457220 922 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU7-187P-201ENST00000458985 68 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RNU6-1037P-201ENST00000459571 107 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RN7SL633P-201ENST00000488974 297 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC018437.1-201ENST00000492214 406 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 RPL22P13-201ENST00000493291 347 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC097462.2-201ENST00000504623 481 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC096745.1-201ENST00000509945 370 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CL1P78423 SMURF2P1-201ENST00000514992 481 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC103810.1-201ENST00000579873 453 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AC023043.3-201ENST00000593113 385 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 AC007318.2-201ENST00000620999 243 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 MIR3651-201ENST00000630427 90 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CL1P78423 AL133216.2-202ENST00000634512 349 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 MIR7157-201ENST00000635801 60 ntBASIC2.39□□□□□ -2.03
CX3CL1P78423 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.39□□□□□ -2.03
CX3CL1P78423 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.39□□□□□ -2.03
CX3CL1P78423 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CL1P78423 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CX3CL1P78423 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CX3CL1P78423 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CX3CL1P78423 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CX3CL1P78423 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CX3CL1P78423 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CL1P78423 MIR422A-201ENST00000362286 90 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 RNU6-845P-201ENST00000362578 103 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 Y_RNA.301-201ENST00000364990 103 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms