Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR7975-201ENST00000619350 68 ntBASIC3□□□□□ -1.93
RAE1P78406 uc_338.22-201ENST00000622722 187 ntBASIC3□□□□□ -1.93
RAE1P78406 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAE1P78406 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAE1P78406 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAE1P78406 HAUS6P2-201ENST00000433254 2404 ntBASIC2.99□□□□□ -1.93
RAE1P78406 RNU6-227P-201ENST00000362865 103 ntBASIC2.99□□□□□ -1.93
RAE1P78406 Y_RNA.132-201ENST00000363421 102 ntBASIC2.99□□□□□ -1.93
RAE1P78406 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 RNU6-331P-201ENST00000384724 107 ntBASIC2.99□□□□□ -1.93
RAE1P78406 MIR559-201ENST00000385188 96 ntBASIC2.99□□□□□ -1.93
RAE1P78406 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.99□□□□□ -1.93
RAE1P78406 AP000275.1-201ENST00000411943 390 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 AC243428.1-201ENST00000421099 264 ntBASIC2.99□□□□□ -1.93
RAE1P78406 EIF4EP2-201ENST00000422816 654 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 MTND3P9-201ENST00000429526 346 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AL591043.1-201ENST00000432461 424 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AC011816.1-201ENST00000441346 546 ntBASIC2.99□□□□□ -1.93
RAE1P78406 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.99□□□□□ -1.93
RAE1P78406 AC090096.1-201ENST00000489168 390 ntBASIC2.99□□□□□ -1.93
RAE1P78406 SMURF2P1-201ENST00000514992 481 ntBASIC2.99□□□□□ -1.93
RAE1P78406 ACA59.2-201ENST00000517061 156 ntBASIC2.99□□□□□ -1.93
RAE1P78406 RNU6-711P-201ENST00000517255 106 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
RAE1P78406 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 AC009163.5-201ENST00000575421 637 ntBASIC2.99□□□□□ -1.93
RAE1P78406 MTCO3P13-201ENST00000577757 781 ntBASIC2.99□□□□□ -1.93
RAE1P78406 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.99□□□□□ -1.93
RAE1P78406 MIR3529-201ENST00000637713 78 ntBASIC2.99□□□□□ -1.93
RAE1P78406 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAE1P78406 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RAE1P78406 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.98□□□□□ -1.93
RAE1P78406 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RAE1P78406 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RAE1P78406 RNU6-858P-201ENST00000362436 107 ntBASIC2.98□□□□□ -1.93
RAE1P78406 SNORA71.3-201ENST00000362582 128 ntBASIC2.98□□□□□ -1.93
RAE1P78406 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
RAE1P78406 RPL21P3-201ENST00000395517 478 ntBASIC2.98□□□□□ -1.93
RAE1P78406 RNU6-1245P-201ENST00000411130 106 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.98□□□□□ -1.93
RAE1P78406 BX276092.3-201ENST00000424182 230 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AC005326.1-201ENST00000429197 123 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AL118496.2-201ENST00000448300 230 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.98□□□□□ -1.93
RAE1P78406 AC146507.2-201ENST00000460608 476 ntBASIC2.98□□□□□ -1.93
RAE1P78406 RNU6-470P-201ENST00000515954 104 ntBASIC2.98□□□□□ -1.93
RAE1P78406 MIR4444-1-201ENST00000581696 74 ntBASIC2.98□□□□□ -1.93
RAE1P78406 MIR4273-201ENST00000582824 84 ntBASIC2.98□□□□□ -1.93
RAE1P78406 MIR4444-2-201ENST00000584390 74 ntBASIC2.98□□□□□ -1.93
RAE1P78406 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.98□□□□□ -1.93
RAE1P78406 AP001836.1-201ENST00000604675 523 ntBASIC2.98□□□□□ -1.93
RAE1P78406 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.98□□□□□ -1.93
RAE1P78406 AC097372.5-201ENST00000623665 376 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RAE1P78406 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RAE1P78406 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.98□□□□□ -1.93
RAE1P78406 MAPK10-322ENST00000641485 4530 ntBASIC2.98□□□□□ -1.93
RAE1P78406 AL021368.2-201ENST00000606125 5352 ntBASIC2.98□□□□□ -1.93
RAE1P78406 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RAE1P78406 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RAE1P78406 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
RAE1P78406 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 MTND5P30-201ENST00000452896 1731 ntBASIC2.97□□□□□ -1.93
RAE1P78406 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
RAE1P78406 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.97□□□□□ -1.93
RAE1P78406 Y_RNA.5-201ENST00000362334 102 ntBASIC2.97□□□□□ -1.93
RAE1P78406 RNU6-490P-201ENST00000362985 107 ntBASIC2.97□□□□□ -1.93
RAE1P78406 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
RAE1P78406 RNU6-487P-201ENST00000365430 104 ntBASIC2.97□□□□□ -1.93
RAE1P78406 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 Y_RNA.463-201ENST00000384271 102 ntBASIC2.97□□□□□ -1.93
RAE1P78406 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RAE1P78406 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC096649.2-201ENST00000416186 393 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC074117.2-201ENST00000417130 397 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 RPL23AP50-201ENST00000434149 455 ntBASIC2.97□□□□□ -1.93
RAE1P78406 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AL031183.1-201ENST00000457667 207 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC096576.1-201ENST00000489014 359 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC110794.1-201ENST00000505816 425 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC022493.2-201ENST00000506122 481 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.97□□□□□ -1.93
RAE1P78406 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.97□□□□□ -1.93
RAE1P78406 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms