Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTBP60709 AL355816.2-201ENST00000610049 647 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AC004908.3-201ENST00000610248 625 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AL159153.1-201ENST00000619688 317 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AC090517.3-201ENST00000625170 141 ntBASIC1.18□□□□□ -2.22
ACTBP60709 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
ACTBP60709 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
ACTBP60709 FGF7P8-201ENST00000402994 292 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.17□□□□□ -2.22
ACTBP60709 RPL22P18-201ENST00000417197 377 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.17□□□□□ -2.22
ACTBP60709 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.17□□□□□ -2.22
ACTBP60709 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.17□□□□□ -2.22
ACTBP60709 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.17□□□□□ -2.22
ACTBP60709 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.17□□□□□ -2.22
ACTBP60709 AC134050.1-201ENST00000495088 933 ntBASIC1.17□□□□□ -2.22
ACTBP60709 MTCYBP40-201ENST00000509390 1135 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC112206.3-201ENST00000514578 389 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC105185.1-201ENST00000518705 535 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.17□□□□□ -2.22
ACTBP60709 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.17□□□□□ -2.22
ACTBP60709 AC123904.2-201ENST00000548059 300 ntBASIC1.17□□□□□ -2.22
ACTBP60709 TRAV32-201ENST00000553993 340 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC002400.1-201ENST00000569310 726 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC012065.4-201ENST00000602445 679 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC112187.2-201ENST00000604345 283 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC016727.1-205ENST00000605437 569 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AL139022.2-201ENST00000606934 443 ntBASIC1.17□□□□□ -2.22
ACTBP60709 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC024940.5-201ENST00000622889 474 ntBASIC1.17□□□□□ -2.22
ACTBP60709 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.17□□□□□ -2.22
ACTBP60709 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ACTBP60709 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
ACTBP60709 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ACTBP60709 RNU6-457P-201ENST00000363999 107 ntBASIC1.16□□□□□ -2.22
ACTBP60709 RNU4-68P-201ENST00000364314 141 ntBASIC1.16□□□□□ -2.22
ACTBP60709 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
ACTBP60709 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
ACTBP60709 RPL37P10-201ENST00000412884 288 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.16□□□□□ -2.22
ACTBP60709 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.16□□□□□ -2.22
ACTBP60709 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.16□□□□□ -2.22
ACTBP60709 AC012308.1-201ENST00000451232 178 ntBASIC1.16□□□□□ -2.22
ACTBP60709 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.16□□□□□ -2.22
ACTBP60709 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AC107934.1-201ENST00000522215 217 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.16□□□□□ -2.22
ACTBP60709 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.16□□□□□ -2.22
ACTBP60709 AC103987.3-201ENST00000582071 292 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AC023043.2-201ENST00000589678 1026 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
ACTBP60709 BNIP3P31-201ENST00000604515 566 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AC013244.3-201ENST00000605614 388 ntBASIC1.16□□□□□ -2.22
ACTBP60709 SCARNA4-202ENST00000625402 129 ntBASIC1.16□□□□□ -2.22
ACTBP60709 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ACTBP60709 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
ACTBP60709 SNORD116-20-201ENST00000384529 92 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RPS20P2-201ENST00000402520 389 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RNU6-174P-201ENST00000410406 106 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RPL23AP36-201ENST00000413895 458 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AL031779.1-201ENST00000415663 330 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AL603825.1-201ENST00000438481 80 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.15□□□□□ -2.23
ACTBP60709 AL035666.1-201ENST00000446195 348 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.15□□□□□ -2.23
ACTBP60709 MTND1P12-201ENST00000455231 147 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.15□□□□□ -2.23
ACTBP60709 AC005908.1-201ENST00000468701 347 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RPL30P6-201ENST00000475925 342 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC093259.1-201ENST00000509755 300 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.15□□□□□ -2.23
ACTBP60709 RNVU1-2-201ENST00000516326 135 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RNU2-10P-201ENST00000516375 211 ntBASIC1.15□□□□□ -2.23
ACTBP60709 Y_RNA.689-201ENST00000516589 107 ntBASIC1.15□□□□□ -2.23
ACTBP60709 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.15□□□□□ -2.23
ACTBP60709 MTATP6P15-201ENST00000527233 835 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AP003034.1-201ENST00000534621 422 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.15□□□□□ -2.23
ACTBP60709 RPL21P5-201ENST00000554662 472 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.15□□□□□ -2.23
ACTBP60709 AP001004.1-201ENST00000582468 324 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.15□□□□□ -2.23
ACTBP60709 VN1R80P-201ENST00000597126 338 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC078795.2-201ENST00000602835 1252 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AL158042.1-201ENST00000605338 460 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AC097478.2-201ENST00000610572 514 ntBASIC1.15□□□□□ -2.23
ACTBP60709 AP000484.1-201ENST00000620067 1252 ntBASIC1.15□□□□□ -2.23
ACTBP60709 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
ACTBP60709 SNORD33-201ENST00000362761 85 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RNU6-931P-201ENST00000363850 107 ntBASIC1.14□□□□□ -2.23
ACTBP60709 U8.10-201ENST00000384260 133 ntBASIC1.14□□□□□ -2.23
ACTBP60709 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RNU6-757P-201ENST00000410334 100 ntBASIC1.14□□□□□ -2.23
ACTBP60709 Y_RNA.595-201ENST00000410403 105 ntBASIC1.14□□□□□ -2.23
ACTBP60709 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.14□□□□□ -2.23
ACTBP60709 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms