Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Y_RNA.222-201ENST00000364264 102 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RNU4-9P-201ENST00000364951 139 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 Y_RNA.471-201ENST00000384312 102 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RNU6-1222P-201ENST00000384615 107 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.26□□□□□ -1.89
CLRN1P58418 CBX3P6-201ENST00000430257 527 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 NDUFB1P1-201ENST00000435191 180 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.26□□□□□ -1.89
CLRN1P58418 AL353705.4-201ENST00000449661 238 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.26□□□□□ -1.89
CLRN1P58418 PCNPP5-201ENST00000452246 481 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 snoU13.30-201ENST00000458951 104 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AL133162.1-201ENST00000463228 453 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 SNRPGP7-201ENST00000469016 106 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 MED28P2-201ENST00000475771 317 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RPL32P34-201ENST00000486380 400 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RPL23AP75-201ENST00000491601 451 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC097462.2-201ENST00000504623 481 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.26□□□□□ -1.89
CLRN1P58418 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.26□□□□□ -1.89
CLRN1P58418 SNORA25.11-201ENST00000515935 105 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RNY3P15-201ENST00000516297 97 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 MIR2114-201ENST00000516645 80 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 RN7SKP272-201ENST00000516988 232 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 SNORA31.23-201ENST00000517219 133 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.26□□□□□ -1.89
CLRN1P58418 AC009163.5-201ENST00000575421 637 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 MIR3160-1-201ENST00000577972 85 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC090425.1-201ENST00000610007 140 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC107871.2-201ENST00000612894 502 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 MIR8062-201ENST00000621515 85 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 AC243829.7-201ENST00000633081 225 ntBASIC3.26□□□□□ -1.89
CLRN1P58418 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLRN1P58418 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CLRN1P58418 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLRN1P58418 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CLRN1P58418 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLRN1P58418 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.25□□□□□ -1.89
CLRN1P58418 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
CLRN1P58418 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLRN1P58418 Z75746.1-201ENST00000440243 2080 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 Y_RNA.26-201ENST00000362539 101 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 Y_RNA.188-201ENST00000363952 111 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 Y_RNA.276-201ENST00000364732 109 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 Y_RNA.396-201ENST00000383949 103 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 RNU6-713P-201ENST00000384761 107 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 MIR544A-201ENST00000384855 91 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 MT-TG-201ENST00000387429 68 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 RPL21P40-201ENST00000428586 483 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 USP9YP16-201ENST00000430287 407 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 FCF1P4-201ENST00000448326 183 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 USP9YP23-201ENST00000455085 407 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 AC010099.1-201ENST00000455434 375 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 Y_RNA.668-201ENST00000516233 93 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 RN7SKP21-201ENST00000516503 220 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 AP000867.2-201ENST00000532468 320 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
CLRN1P58418 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 SCARNA4-201ENST00000629045 128 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.25□□□□□ -1.89
CLRN1P58418 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.25□□□□□ -1.89
CLRN1P58418 MIR3199-2-201ENST00000636243 86 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLRN1P58418 AC002546.1-201ENST00000588041 2504 ntBASIC3.25□□□□□ -1.89
CLRN1P58418 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLRN1P58418 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLRN1P58418 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLRN1P58418 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLRN1P58418 Y_RNA.64-201ENST00000362845 102 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 U3.13-201ENST00000364804 214 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RNU6-806P-201ENST00000365147 105 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RNU6-1286P-201ENST00000383871 107 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL21P75-201ENST00000396599 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL21P28-201ENST00000401418 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.24□□□□□ -1.89
CLRN1P58418 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 EIF1AXP1-201ENST00000419267 435 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 AL590556.1-201ENST00000423231 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL23AP95-201ENST00000426806 265 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC108059.2-201ENST00000434626 151 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL23AP22-201ENST00000437556 453 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 AL714022.1-201ENST00000439897 151 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC009296.1-201ENST00000443146 155 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.24□□□□□ -1.89
CLRN1P58418 U8.22-201ENST00000459141 133 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL21P39-201ENST00000463605 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC087190.1-201ENST00000484462 480 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC107032.1-201ENST00000485945 480 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC132942.1-201ENST00000486753 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC093591.1-201ENST00000491435 481 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 AC104564.1-201ENST00000493028 407 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL21P16-201ENST00000495531 483 ntBASIC3.24□□□□□ -1.89
CLRN1P58418 RPL7P47-201ENST00000497299 556 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms