Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
PDX1P52945 SNORA14.1-201ENST00000516113 141 ntBASIC2.55□□□□□ -2
PDX1P52945 SNORA31.6-201ENST00000516241 130 ntBASIC2.55□□□□□ -2
PDX1P52945 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.55□□□□□ -2
PDX1P52945 AP004607.1-201ENST00000524456 203 ntBASIC2.55□□□□□ -2
PDX1P52945 AC005498.1-201ENST00000592125 465 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-6P-201ENST00000606623 107 ntBASIC2.55□□□□□ -2
PDX1P52945 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.55□□□□□ -2
PDX1P52945 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
PDX1P52945 AC090617.7-201ENST00000623952 126 ntBASIC2.55□□□□□ -2
PDX1P52945 SCARNA4-202ENST00000625402 129 ntBASIC2.55□□□□□ -2
PDX1P52945 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.55□□□□□ -2
PDX1P52945 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
PDX1P52945 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.54□□□□□ -2
PDX1P52945 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.54□□□□□ -2
PDX1P52945 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.54□□□□□ -2
PDX1P52945 RNU6-78P-201ENST00000362897 107 ntBASIC2.54□□□□□ -2
PDX1P52945 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.54□□□□□ -2
PDX1P52945 PTGES3P4-201ENST00000426243 356 ntBASIC2.54□□□□□ -2
PDX1P52945 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
PDX1P52945 HMGB1P31-201ENST00000437242 427 ntBASIC2.54□□□□□ -2
PDX1P52945 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
PDX1P52945 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
PDX1P52945 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDX1P52945 AC113155.1-201ENST00000511141 769 ntBASIC2.54□□□□□ -2
PDX1P52945 SNORA19.2-201ENST00000516013 114 ntBASIC2.54□□□□□ -2
PDX1P52945 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
PDX1P52945 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDX1P52945 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.54□□□□□ -2
PDX1P52945 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.54□□□□□ -2
PDX1P52945 AC023050.3-201ENST00000541142 333 ntBASIC2.54□□□□□ -2
PDX1P52945 GLYCAM1-201ENST00000546596 285 ntBASIC2.54□□□□□ -2
PDX1P52945 AL133241.1-201ENST00000556832 487 ntBASIC2.54□□□□□ -2
PDX1P52945 AC060780.3-201ENST00000589464 80 ntBASIC2.54□□□□□ -2
PDX1P52945 AC008121.1-201ENST00000603244 268 ntBASIC2.54□□□□□ -2
PDX1P52945 FAM157A-202ENST00000615155 405 ntBASIC2.54□□□□□ -2
PDX1P52945 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.54□□□□□ -2
PDX1P52945 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.54□□□□□ -2
PDX1P52945 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.54□□□□□ -2
PDX1P52945 RMST_7.1-201ENST00000621935 268 ntBASIC2.54□□□□□ -2
PDX1P52945 AC064859.1-201ENST00000624741 174 ntBASIC2.54□□□□□ -2
PDX1P52945 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.54□□□□□ -2
PDX1P52945 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.53□□□□□ -2
PDX1P52945 SNORD21-201ENST00000383953 95 ntBASIC2.53□□□□□ -2
PDX1P52945 SNORA3.2-201ENST00000408221 125 ntBASIC2.53□□□□□ -2
PDX1P52945 RNU4-26P-201ENST00000410270 107 ntBASIC2.53□□□□□ -2
PDX1P52945 MTND1P23-201ENST00000416931 372 ntBASIC2.53□□□□□ -2
PDX1P52945 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.53□□□□□ -2
PDX1P52945 AC004383.1-201ENST00000438135 289 ntBASIC2.53□□□□□ -2
PDX1P52945 AL513124.1-201ENST00000450410 614 ntBASIC2.53□□□□□ -2
PDX1P52945 RN7SL297P-201ENST00000483161 293 ntBASIC2.53□□□□□ -2
PDX1P52945 RNU6-1069P-201ENST00000516612 133 ntBASIC2.53□□□□□ -2
PDX1P52945 SNORA43.2-201ENST00000516652 128 ntBASIC2.53□□□□□ -2
PDX1P52945 MTCO3P13-201ENST00000577757 781 ntBASIC2.53□□□□□ -2
PDX1P52945 SNORD53-201ENST00000579969 78 ntBASIC2.53□□□□□ -2
PDX1P52945 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.53□□□□□ -2
PDX1P52945 MIR5692C1-201ENST00000585309 91 ntBASIC2.53□□□□□ -2
PDX1P52945 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
PDX1P52945 Z82243.1-201ENST00000609432 473 ntBASIC2.53□□□□□ -2
PDX1P52945 AC006504.8-201ENST00000621046 635 ntBASIC2.53□□□□□ -2
PDX1P52945 AL359757.2-201ENST00000624309 274 ntBASIC2.53□□□□□ -2
PDX1P52945 AC100810.6-201ENST00000638068 285 ntBASIC2.53□□□□□ -2
PDX1P52945 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PDX1P52945 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
PDX1P52945 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
PDX1P52945 AC121333.1-201ENST00000567488 2709 ntBASIC2.53□□□□□ -2
PDX1P52945 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2.01
PDX1P52945 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
PDX1P52945 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.52□□□□□ -2.01
PDX1P52945 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDX1P52945 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDX1P52945 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
PDX1P52945 Y_RNA.373-201ENST00000365600 103 ntBASIC2.52□□□□□ -2.01
PDX1P52945 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDX1P52945 RNU6-19P-201ENST00000384718 107 ntBASIC2.52□□□□□ -2.01
PDX1P52945 SNORD73A-201ENST00000386062 65 ntBASIC2.52□□□□□ -2.01
PDX1P52945 RAP1BP3-201ENST00000407180 549 ntBASIC2.52□□□□□ -2.01
PDX1P52945 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.52□□□□□ -2.01
PDX1P52945 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
PDX1P52945 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
PDX1P52945 TOMM20P4-201ENST00000427861 435 ntBASIC2.52□□□□□ -2.01
PDX1P52945 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.52□□□□□ -2.01
PDX1P52945 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.52□□□□□ -2.01
PDX1P52945 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.52□□□□□ -2.01
PDX1P52945 AP001324.2-201ENST00000461163 319 ntBASIC2.52□□□□□ -2.01
PDX1P52945 MED28P2-201ENST00000475771 317 ntBASIC2.52□□□□□ -2.01
PDX1P52945 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
PDX1P52945 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
PDX1P52945 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.52□□□□□ -2.01
PDX1P52945 RNA5SP320-201ENST00000516263 124 ntBASIC2.52□□□□□ -2.01
PDX1P52945 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.52□□□□□ -2.01
PDX1P52945 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.52□□□□□ -2.01
PDX1P52945 AC007151.1-201ENST00000572774 483 ntBASIC2.52□□□□□ -2.01
PDX1P52945 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDX1P52945 AC023043.3-201ENST00000593113 385 ntBASIC2.52□□□□□ -2.01
PDX1P52945 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
PDX1P52945 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.52□□□□□ -2.01
PDX1P52945 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
PDX1P52945 AL136221.1-201ENST00000621449 509 ntBASIC2.52□□□□□ -2.01
PDX1P52945 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms