Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AL160314.1-201ENST00000490836 438 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
CLK3P49761 RNU1-45P-201ENST00000517191 141 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 TRAV37-201ENST00000553906 342 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 MIR5701-3-201ENST00000578890 82 ntBASIC3.35□□□□□ -1.87
CLK3P49761 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK3P49761 MIR5701-1-201ENST00000585138 82 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.35□□□□□ -1.87
CLK3P49761 MIR3976-201ENST00000606807 139 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR7851-201ENST00000610611 160 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR1244-1-201ENST00000612829 85 ntBASIC3.35□□□□□ -1.87
CLK3P49761 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR5701-2-201ENST00000615634 82 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR1244-3-201ENST00000635744 85 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR1244-2-201ENST00000636449 85 ntBASIC3.35□□□□□ -1.87
CLK3P49761 MIR1244-4-202ENST00000636813 85 ntBASIC3.35□□□□□ -1.87
CLK3P49761 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK3P49761 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC118273.1-201ENST00000525324 3006 ntBASIC3.35□□□□□ -1.87
CLK3P49761 AC068647.1-201ENST00000489539 2265 ntBASIC3.35□□□□□ -1.87
CLK3P49761 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CLK3P49761 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLK3P49761 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLK3P49761 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK3P49761 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLK3P49761 RNU6-1167P-201ENST00000363227 94 ntBASIC3.34□□□□□ -1.87
CLK3P49761 SNORA62.3-201ENST00000365110 153 ntBASIC3.34□□□□□ -1.87
CLK3P49761 Y_RNA.533-201ENST00000384596 114 ntBASIC3.34□□□□□ -1.87
CLK3P49761 MIR628-201ENST00000385229 95 ntBASIC3.34□□□□□ -1.87
CLK3P49761 SNORA69.1-201ENST00000390904 137 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK3P49761 AC004383.1-201ENST00000438135 289 ntBASIC3.34□□□□□ -1.87
CLK3P49761 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
CLK3P49761 RNU6-1037P-201ENST00000459571 107 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC133134.1-201ENST00000466800 359 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK3P49761 SNORA81.3-201ENST00000517283 198 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC023632.4-201ENST00000517783 191 ntBASIC3.34□□□□□ -1.87
CLK3P49761 TRAV28-201ENST00000557548 323 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK3P49761 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK3P49761 AL158827.2-201ENST00000602494 330 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AL355877.2-201ENST00000603670 358 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC009779.6-201ENST00000603972 165 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC006077.1-201ENST00000604746 343 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AL121917.1-203ENST00000605534 577 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
CLK3P49761 RNU1-30P-201ENST00000606575 163 ntBASIC3.34□□□□□ -1.87
CLK3P49761 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.34□□□□□ -1.87
CLK3P49761 RMST_4.1-201ENST00000616886 107 ntBASIC3.34□□□□□ -1.87
CLK3P49761 FTX_2.1-201ENST00000618816 94 ntBASIC3.34□□□□□ -1.87
CLK3P49761 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
CLK3P49761 AC022149.2-201ENST00000621061 203 ntBASIC3.34□□□□□ -1.87
CLK3P49761 AL691447.3-201ENST00000635020 330 ntBASIC3.34□□□□□ -1.87
CLK3P49761 ZNF299P-201ENST00000406845 1804 ntBASIC3.34□□□□□ -1.87
CLK3P49761 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
CLK3P49761 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.34□□□□□ -1.87
CLK3P49761 AC007785.2-201ENST00000598627 1916 ntBASIC3.34□□□□□ -1.88
CLK3P49761 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.88
CLK3P49761 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK3P49761 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK3P49761 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CLK3P49761 UBE2L2-201ENST00000254302 429 ntBASIC3.33□□□□□ -1.88
CLK3P49761 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK3P49761 Y_RNA.180-201ENST00000363867 113 ntBASIC3.33□□□□□ -1.88
CLK3P49761 MIR200C-201ENST00000384980 68 ntBASIC3.33□□□□□ -1.88
CLK3P49761 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
CLK3P49761 RNU2-33P-201ENST00000410344 192 ntBASIC3.33□□□□□ -1.88
CLK3P49761 EIF4EP2-201ENST00000422816 654 ntBASIC3.33□□□□□ -1.88
CLK3P49761 AC092423.1-201ENST00000430165 186 ntBASIC3.33□□□□□ -1.88
CLK3P49761 PIGFP3-201ENST00000441918 722 ntBASIC3.33□□□□□ -1.88
CLK3P49761 NDUFB1P2-201ENST00000449477 176 ntBASIC3.33□□□□□ -1.88
CLK3P49761 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK3P49761 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
CLK3P49761 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
CLK3P49761 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK3P49761 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK3P49761 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK3P49761 CASP1P1-201ENST00000526345 212 ntBASIC3.33□□□□□ -1.88
CLK3P49761 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK3P49761 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.33□□□□□ -1.88
CLK3P49761 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
CLK3P49761 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
CLK3P49761 AC107294.1-201ENST00000609524 467 ntBASIC3.33□□□□□ -1.88
CLK3P49761 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
CLK3P49761 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
CLK3P49761 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CLK3P49761 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
CLK3P49761 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK3P49761 FAM35BP-202ENST00000497389 3337 ntBASIC3.32□□□□□ -1.88
CLK3P49761 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK3P49761 AL157777.2-201ENST00000258070 137 ntBASIC3.32□□□□□ -1.88
CLK3P49761 MIR335-201ENST00000362173 94 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU1-76P-201ENST00000362903 159 ntBASIC3.32□□□□□ -1.88
CLK3P49761 RNU6-595P-201ENST00000363944 107 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms