Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 Y_RNA.687-201ENST00000516558 91 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 SNORA18.6-201ENST00000516792 115 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.69□□□□□ -2.14
CSNK1A1P48729 RANP3-201ENST00000530970 276 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 AC233702.2-202ENST00000562547 291 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CSNK1A1P48729 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
CSNK1A1P48729 AC138649.3-201ENST00000622154 254 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 AC011155.2-201ENST00000623202 216 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.69□□□□□ -2.14
CSNK1A1P48729 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.69□□□□□ -2.14
CSNK1A1P48729 MTND5P17-201ENST00000418405 1603 ntBASIC1.69□□□□□ -2.14
CSNK1A1P48729 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 MIR1-2-201ENST00000384961 85 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 MIR518A2-201ENST00000384966 87 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 RNU6-387P-201ENST00000411331 105 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 BX295541.1-201ENST00000417774 250 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC008267.5-201ENST00000424928 265 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 MTND2P29-201ENST00000438595 412 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC104058.1-201ENST00000448028 297 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 MTND3P25-201ENST00000509243 135 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AP004607.1-201ENST00000524456 203 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 OR5AL2P-201ENST00000532185 920 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 BNIP3P6-201ENST00000549284 499 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC073539.2-201ENST00000597113 165 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC243960.4-201ENST00000600532 288 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 BNIP3P30-201ENST00000601184 574 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 SNRPGP17-201ENST00000603780 214 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 SEPT7P9-203ENST00000604116 343 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC021646.1-201ENST00000605469 484 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 NDUFA8P1-201ENST00000605525 367 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 MIR98-201ENST00000606724 119 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AC013412.1-201ENST00000610687 192 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.68□□□□□ -2.14
CSNK1A1P48729 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.68□□□□□ -2.14
CSNK1A1P48729 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSNK1A1P48729 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC009487.4-201ENST00000624969 3585 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CSNK1A1P48729 SNORD114-19-201ENST00000363072 75 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU6-529P-201ENST00000363383 104 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU6-282P-201ENST00000365357 103 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU6-116P-201ENST00000384042 109 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU6-622P-201ENST00000384272 103 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 AL033519.2-201ENST00000403958 392 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU4-26P-201ENST00000410270 107 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 OR6C66P-201ENST00000414917 930 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 GPR143P-201ENST00000434155 205 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 MTND2P4-201ENST00000445034 1004 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 MTCO2P6-201ENST00000463134 685 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 BET1P1-201ENST00000482276 359 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 HMGB1P30-201ENST00000492455 606 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 MTCO3P28-201ENST00000513351 515 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RNU6-410P-201ENST00000517006 107 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 SNORA31.23-201ENST00000517219 133 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 MIR4775-201ENST00000581168 75 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 AC093788.1-201ENST00000609356 927 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 RMST_7.1-201ENST00000621935 268 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 MIR3529-201ENST00000637713 78 ntBASIC1.67□□□□□ -2.14
CSNK1A1P48729 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CSNK1A1P48729 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CSNK1A1P48729 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CSNK1A1P48729 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 RNU6-1010P-201ENST00000362757 107 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 SNORA62.1-201ENST00000364287 154 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 RNU6-108P-201ENST00000365558 107 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 RNU6-1032P-201ENST00000384100 107 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 SNORD116-20-201ENST00000384529 92 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CSNK1A1P48729 AL079342.1-201ENST00000401460 267 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 AL356432.1-201ENST00000405809 419 ntBASIC1.66□□□□□ -2.14
CSNK1A1P48729 RNU2-3P-201ENST00000410144 191 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms