Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC024581.2-201ENST00000619986 252 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC241585.2-209ENST00000638217 143 ntBASIC2.9□□□□□ -1.95
SOX2P48431 AC233263.6-201ENST00000631132 1963 ntBASIC2.9□□□□□ -1.95
SOX2P48431 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.9□□□□□ -1.95
SOX2P48431 MTND5P9-201ENST00000503854 1755 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC004944.1-201ENST00000517807 3059 ntBASIC2.89□□□□□ -1.95
SOX2P48431 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX2P48431 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SOX2P48431 SNORD56.1-201ENST00000362913 68 ntBASIC2.89□□□□□ -1.95
SOX2P48431 RNY1P16-201ENST00000363063 111 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AL359837.1-201ENST00000381357 287 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC117470.1-201ENST00000381974 330 ntBASIC2.89□□□□□ -1.95
SOX2P48431 RNU6-639P-201ENST00000384074 107 ntBASIC2.89□□□□□ -1.95
SOX2P48431 Y_RNA.533-201ENST00000384596 114 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC023141.4-201ENST00000412031 328 ntBASIC2.89□□□□□ -1.95
SOX2P48431 RPL32P35-201ENST00000415214 394 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC074117.2-201ENST00000417130 397 ntBASIC2.89□□□□□ -1.95
SOX2P48431 MCFD2P1-201ENST00000417812 300 ntBASIC2.89□□□□□ -1.95
SOX2P48431 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.89□□□□□ -1.95
SOX2P48431 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.89□□□□□ -1.95
SOX2P48431 AL353997.1-201ENST00000432936 108 ntBASIC2.89□□□□□ -1.95
SOX2P48431 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.89□□□□□ -1.95
SOX2P48431 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.89□□□□□ -1.95
SOX2P48431 AC099799.1-201ENST00000439809 192 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AL161651.1-201ENST00000440882 223 ntBASIC2.89□□□□□ -1.95
SOX2P48431 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.89□□□□□ -1.95
SOX2P48431 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.89□□□□□ -1.95
SOX2P48431 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
SOX2P48431 MED28P2-201ENST00000475771 317 ntBASIC2.89□□□□□ -1.95
SOX2P48431 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.89□□□□□ -1.95
SOX2P48431 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.89□□□□□ -1.95
SOX2P48431 RNU6-327P-201ENST00000516270 127 ntBASIC2.89□□□□□ -1.95
SOX2P48431 ACA59.2-201ENST00000517061 156 ntBASIC2.89□□□□□ -1.95
SOX2P48431 SUB1P3-201ENST00000564581 315 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC009163.5-201ENST00000575421 637 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.89□□□□□ -1.95
SOX2P48431 AP001836.1-201ENST00000604675 523 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AL355802.3-201ENST00000607571 545 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
SOX2P48431 MIR3529-201ENST00000637713 78 ntBASIC2.89□□□□□ -1.95
SOX2P48431 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SOX2P48431 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SOX2P48431 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SOX2P48431 ZNF299P-201ENST00000406845 1804 ntBASIC2.89□□□□□ -1.95
SOX2P48431 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 RNU1-70P-201ENST00000362618 164 ntBASIC2.88□□□□□ -1.95
SOX2P48431 Y_RNA.123-201ENST00000363338 102 ntBASIC2.88□□□□□ -1.95
SOX2P48431 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SOX2P48431 RNU6-1160P-201ENST00000384546 104 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.88□□□□□ -1.95
SOX2P48431 MTND2P23-201ENST00000422990 651 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC008267.5-201ENST00000424928 265 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.88□□□□□ -1.95
SOX2P48431 AL031183.1-201ENST00000457667 207 ntBASIC2.88□□□□□ -1.95
SOX2P48431 FCF1P8-201ENST00000510322 597 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC104619.4-201ENST00000510773 249 ntBASIC2.88□□□□□ -1.95
SOX2P48431 RNU5F-8P-201ENST00000515941 111 ntBASIC2.88□□□□□ -1.95
SOX2P48431 RNU6-1045P-201ENST00000516321 107 ntBASIC2.88□□□□□ -1.95
SOX2P48431 SNORD19.2-201ENST00000516978 73 ntBASIC2.88□□□□□ -1.95
SOX2P48431 SNORA31.21-201ENST00000517180 77 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.88□□□□□ -1.95
SOX2P48431 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 MIR5696-201ENST00000578474 85 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC019159.1-201ENST00000605094 187 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC005014.2-201ENST00000607795 599 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC004832.5-201ENST00000608677 401 ntBASIC2.88□□□□□ -1.95
SOX2P48431 AC006157.1-201ENST00000611750 366 ntBASIC2.88□□□□□ -1.95
SOX2P48431 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.88□□□□□ -1.95
SOX2P48431 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SOX2P48431 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.87□□□□□ -1.95
SOX2P48431 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SOX2P48431 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SOX2P48431 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SOX2P48431 Y_RNA.148-201ENST00000363557 117 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SOX2P48431 RNU6-784P-201ENST00000384330 106 ntBASIC2.87□□□□□ -1.95
SOX2P48431 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX2P48431 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.87□□□□□ -1.95
SOX2P48431 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX2P48431 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX2P48431 AC243964.1-201ENST00000441814 261 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.87□□□□□ -1.95
SOX2P48431 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX2P48431 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.87□□□□□ -1.95
SOX2P48431 SNORA25.10-201ENST00000515926 124 ntBASIC2.87□□□□□ -1.95
SOX2P48431 RN7SKP21-201ENST00000516503 220 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.87□□□□□ -1.95
SOX2P48431 AC245166.1-201ENST00000521012 253 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.87□□□□□ -1.95
SOX2P48431 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.87□□□□□ -1.95
SOX2P48431 AL158827.2-201ENST00000602494 330 ntBASIC2.87□□□□□ -1.95
SOX2P48431 AL162713.1-201ENST00000604480 262 ntBASIC2.87□□□□□ -1.95
SOX2P48431 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms