Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL133216.2-202ENST00000634512 349 ntBASIC2.56□□□□□ -2
SLC6A12P48065 AL161431.1-201ENST00000618966 4205 ntBASIC2.56□□□□□ -2
SLC6A12P48065 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A12P48065 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A12P48065 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC6A12P48065 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC6A12P48065 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A12P48065 Y_RNA.184-201ENST00000363884 108 ntBASIC2.55□□□□□ -2
SLC6A12P48065 Y_RNA.263-201ENST00000364659 114 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RNU1-100P-201ENST00000365255 165 ntBASIC2.55□□□□□ -2
SLC6A12P48065 SNORA32.2-201ENST00000384049 122 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RNU6-434P-201ENST00000384376 107 ntBASIC2.55□□□□□ -2
SLC6A12P48065 Y_RNA.530-201ENST00000384587 101 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RNU6-1009P-201ENST00000390996 107 ntBASIC2.55□□□□□ -2
SLC6A12P48065 AL356432.1-201ENST00000405809 419 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RPLP0P7-201ENST00000416050 667 ntBASIC2.55□□□□□ -2
SLC6A12P48065 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
SLC6A12P48065 IFNA20P-201ENST00000436840 528 ntBASIC2.55□□□□□ -2
SLC6A12P48065 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.55□□□□□ -2
SLC6A12P48065 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RPL7P12-201ENST00000446719 750 ntBASIC2.55□□□□□ -2
SLC6A12P48065 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
SLC6A12P48065 ADAM3A-203ENST00000461344 2157 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RPL7P43-201ENST00000478876 753 ntBASIC2.55□□□□□ -2
SLC6A12P48065 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
SLC6A12P48065 SNORA25.17-201ENST00000517184 124 ntBASIC2.55□□□□□ -2
SLC6A12P48065 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.55□□□□□ -2
SLC6A12P48065 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
SLC6A12P48065 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC6A12P48065 FGF7P1-201ENST00000582820 288 ntBASIC2.55□□□□□ -2
SLC6A12P48065 MIR3616-201ENST00000584070 92 ntBASIC2.55□□□□□ -2
SLC6A12P48065 AL391813.1-201ENST00000603098 260 ntBASIC2.55□□□□□ -2
SLC6A12P48065 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A12P48065 AC135776.4-201ENST00000624300 1904 ntBASIC2.55□□□□□ -2
SLC6A12P48065 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A12P48065 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A12P48065 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
SLC6A12P48065 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC6A12P48065 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SLC6A12P48065 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A12P48065 Y_RNA.33-201ENST00000362591 102 ntBASIC2.54□□□□□ -2
SLC6A12P48065 Y_RNA.414-201ENST00000384011 101 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
SLC6A12P48065 MIR301A-201ENST00000385261 86 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RPS4XP7-201ENST00000406274 780 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU6-607P-201ENST00000411283 108 ntBASIC2.54□□□□□ -2
SLC6A12P48065 MTND3P8-201ENST00000412909 339 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC009161.1-201ENST00000417306 376 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL353621.1-201ENST00000418219 243 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A12P48065 AC092001.1-201ENST00000453012 261 ntBASIC2.54□□□□□ -2
SLC6A12P48065 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 UBE2DNL-203ENST00000474922 222 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
SLC6A12P48065 AC008549.1-201ENST00000512900 643 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
SLC6A12P48065 SNORA14.1-201ENST00000516113 141 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU6-864P-201ENST00000516256 108 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNA5SP282-201ENST00000516355 108 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU6-1069P-201ENST00000516612 133 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RNU7-30P-201ENST00000516835 62 ntBASIC2.54□□□□□ -2
SLC6A12P48065 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC243972.3-201ENST00000539655 198 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC006199.1-201ENST00000548728 219 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A12P48065 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
SLC6A12P48065 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL670379.10-201ENST00000604330 253 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL670379.9-201ENST00000605428 253 ntBASIC2.54□□□□□ -2
SLC6A12P48065 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.54□□□□□ -2
SLC6A12P48065 AL121757.2-201ENST00000611223 313 ntBASIC2.54□□□□□ -2
SLC6A12P48065 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC6A12P48065 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SLC6A12P48065 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SLC6A12P48065 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC6A12P48065 RNU6-254P-201ENST00000363377 107 ntBASIC2.53□□□□□ -2
SLC6A12P48065 Y_RNA.142-201ENST00000363491 102 ntBASIC2.53□□□□□ -2
SLC6A12P48065 RNU6-384P-201ENST00000364900 104 ntBASIC2.53□□□□□ -2
SLC6A12P48065 Y_RNA.301-201ENST00000364990 103 ntBASIC2.53□□□□□ -2
SLC6A12P48065 RNU6-395P-201ENST00000365662 106 ntBASIC2.53□□□□□ -2
SLC6A12P48065 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A12P48065 SNORA26.7-201ENST00000391288 122 ntBASIC2.53□□□□□ -2
SLC6A12P48065 SNORA11.2-201ENST00000408318 127 ntBASIC2.53□□□□□ -2
SLC6A12P48065 RN7SKP32-201ENST00000410167 303 ntBASIC2.53□□□□□ -2
SLC6A12P48065 RNU6-1025P-201ENST00000410629 104 ntBASIC2.53□□□□□ -2
SLC6A12P48065 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.53□□□□□ -2
SLC6A12P48065 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
SLC6A12P48065 MTND4LP16-201ENST00000440828 295 ntBASIC2.53□□□□□ -2
SLC6A12P48065 MTND1P11-201ENST00000456661 876 ntBASIC2.53□□□□□ -2
SLC6A12P48065 AMD1P1-201ENST00000457220 922 ntBASIC2.53□□□□□ -2
SLC6A12P48065 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A12P48065 AC103851.1-201ENST00000506833 274 ntBASIC2.53□□□□□ -2
SLC6A12P48065 AC008716.1-201ENST00000511084 513 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms