Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RPL21P41-201ENST00000459863 264 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC012181.1-201ENST00000479895 423 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC093278.1-201ENST00000494700 600 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU6-64P-201ENST00000517119 105 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.2□□□□□ -2.06
ATRXP46100 AL356432.3-201ENST00000568952 465 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC006600.1-201ENST00000572529 153 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC012443.1-201ENST00000605605 231 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC087045.1-201ENST00000605856 382 ntBASIC2.2□□□□□ -2.06
ATRXP46100 SNORD58B-201ENST00000607313 66 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC105429.2-201ENST00000610567 517 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AL355810.1-201ENST00000614629 552 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC244517.12-201ENST00000623581 663 ntBASIC2.2□□□□□ -2.06
ATRXP46100 SNORA24.1-201ENST00000384401 135 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU6-1160P-201ENST00000384546 104 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AL356776.1-201ENST00000406574 447 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU4-78P-201ENST00000410940 126 ntBASIC2.2□□□□□ -2.06
ATRXP46100 Y_RNA.646-201ENST00000410980 101 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.2□□□□□ -2.06
ATRXP46100 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.2□□□□□ -2.06
ATRXP46100 SNRPFP3-201ENST00000457792 225 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RNU4-60P-201ENST00000517239 135 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.2□□□□□ -2.06
ATRXP46100 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ATRXP46100 SNRPGP18-201ENST00000553000 214 ntBASIC2.2□□□□□ -2.06
ATRXP46100 AC002044.1-201ENST00000606707 158 ntBASIC2.2□□□□□ -2.06
ATRXP46100 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.2□□□□□ -2.06
ATRXP46100 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
ATRXP46100 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.2□□□□□ -2.06
ATRXP46100 SNORA31-201ENST00000362607 130 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RNU6-629P-201ENST00000384061 103 ntBASIC2.19□□□□□ -2.06
ATRXP46100 Y_RNA.433-201ENST00000384089 102 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RPS12P24-201ENST00000412619 387 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.19□□□□□ -2.06
ATRXP46100 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.19□□□□□ -2.06
ATRXP46100 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.19□□□□□ -2.06
ATRXP46100 snoU13.3-201ENST00000459441 104 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC027575.1-201ENST00000481064 460 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.19□□□□□ -2.06
ATRXP46100 RN7SKP43-201ENST00000516173 320 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RNU6-1045P-201ENST00000516321 107 ntBASIC2.19□□□□□ -2.06
ATRXP46100 CBX3P8-201ENST00000532412 525 ntBASIC2.19□□□□□ -2.06
ATRXP46100 SNORD84-203ENST00000584275 78 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC022432.1-201ENST00000595739 310 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.19□□□□□ -2.06
ATRXP46100 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.19□□□□□ -2.06
ATRXP46100 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.19□□□□□ -2.06
ATRXP46100 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATRXP46100 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ATRXP46100 Y_RNA.166-201ENST00000363730 102 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RNU6-339P-201ENST00000384310 107 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RNU6-178P-201ENST00000384631 104 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AL606923.1-201ENST00000406616 190 ntBASIC2.19□□□□□ -2.06
ATRXP46100 PGBD4P6-201ENST00000421501 610 ntBASIC2.19□□□□□ -2.06
ATRXP46100 SNORD19B-201ENST00000459623 84 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC116562.3-201ENST00000506136 177 ntBASIC2.19□□□□□ -2.06
ATRXP46100 FAM206BP-201ENST00000510179 541 ntBASIC2.19□□□□□ -2.06
ATRXP46100 RNU6-470P-201ENST00000515954 104 ntBASIC2.19□□□□□ -2.06
ATRXP46100 MIR892C-201ENST00000516410 77 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AC068587.5-201ENST00000528506 175 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AP000907.2-201ENST00000530827 353 ntBASIC2.19□□□□□ -2.06
ATRXP46100 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
ATRXP46100 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.19□□□□□ -2.06
ATRXP46100 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.19□□□□□ -2.06
ATRXP46100 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ATRXP46100 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATRXP46100 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ATRXP46100 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.18□□□□□ -2.06
ATRXP46100 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.18□□□□□ -2.06
ATRXP46100 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
ATRXP46100 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.18□□□□□ -2.06
ATRXP46100 Y_RNA.151-201ENST00000363566 112 ntBASIC2.18□□□□□ -2.06
ATRXP46100 EIF4E2P1-201ENST00000393781 255 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.18□□□□□ -2.06
ATRXP46100 RPL7P43-201ENST00000478876 753 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.18□□□□□ -2.06
ATRXP46100 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.18□□□□□ -2.06
ATRXP46100 RBBP4P6-201ENST00000508098 202 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.18□□□□□ -2.06
ATRXP46100 RPL39P5-202ENST00000512505 151 ntBASIC2.18□□□□□ -2.06
ATRXP46100 SNORA31.20-201ENST00000517111 133 ntBASIC2.18□□□□□ -2.06
ATRXP46100 COPS8P3-201ENST00000526024 482 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AC026371.1-201ENST00000551867 419 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.18□□□□□ -2.06
ATRXP46100 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.18□□□□□ -2.06
ATRXP46100 Y_RNA.72-201ENST00000362894 103 ntBASIC2.18□□□□□ -2.06
ATRXP46100 U8.10-201ENST00000384260 133 ntBASIC2.18□□□□□ -2.06
ATRXP46100 AL512633.1-201ENST00000399931 655 ntBASIC2.18□□□□□ -2.06
ATRXP46100 MTCO2P12-201ENST00000427426 682 ntBASIC2.18□□□□□ -2.06
ATRXP46100 snoU109.4-201ENST00000458953 143 ntBASIC2.18□□□□□ -2.06
ATRXP46100 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.18□□□□□ -2.06
ATRXP46100 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.18□□□□□ -2.06
ATRXP46100 RNU6-1038P-201ENST00000516516 104 ntBASIC2.18□□□□□ -2.06
ATRXP46100 RNU6-1137P-201ENST00000517073 99 ntBASIC2.18□□□□□ -2.06
ATRXP46100 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATRXP46100 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.18□□□□□ -2.06
ATRXP46100 AC105224.1-201ENST00000587055 421 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms