Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNFP41002 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNFP41002 AL391987.6-201ENST00000305671 199 ntBASIC3.97□□□□□ -1.77
CCNFP41002 Y_RNA.237-201ENST00000364439 102 ntBASIC3.97□□□□□ -1.77
CCNFP41002 RNU6-142P-201ENST00000384019 107 ntBASIC3.97□□□□□ -1.77
CCNFP41002 Y_RNA.562-201ENST00000384695 113 ntBASIC3.97□□□□□ -1.77
CCNFP41002 SNORD78.2-201ENST00000391076 69 ntBASIC3.97□□□□□ -1.77
CCNFP41002 Y_RNA.602-201ENST00000410535 92 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.97□□□□□ -1.77
CCNFP41002 RPL23AP82-202ENST00000427528 469 ntBASIC3.97□□□□□ -1.77
CCNFP41002 HMGB1P37-201ENST00000439613 609 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AF186996.7-201ENST00000492781 209 ntBASIC3.97□□□□□ -1.77
CCNFP41002 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
CCNFP41002 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
CCNFP41002 MIR4659A-201ENST00000580269 81 ntBASIC3.97□□□□□ -1.77
CCNFP41002 RN7SL600P-201ENST00000581811 299 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AC073657.2-201ENST00000605661 303 ntBASIC3.97□□□□□ -1.77
CCNFP41002 RPL23AP88-201ENST00000605759 454 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AC240442.1-201ENST00000616055 283 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AC068831.7-201ENST00000616954 363 ntBASIC3.97□□□□□ -1.77
CCNFP41002 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
CCNFP41002 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNFP41002 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCNFP41002 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.97□□□□□ -1.77
CCNFP41002 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCNFP41002 AC007496.3-201ENST00000624987 3443 ntBASIC3.96□□□□□ -1.77
CCNFP41002 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCNFP41002 RNU6-1301P-201ENST00000362724 104 ntBASIC3.96□□□□□ -1.78
CCNFP41002 SNORA29-201ENST00000384183 140 ntBASIC3.96□□□□□ -1.78
CCNFP41002 RNU6-17P-201ENST00000384245 107 ntBASIC3.96□□□□□ -1.78
CCNFP41002 RNU6-18P-201ENST00000384527 107 ntBASIC3.96□□□□□ -1.78
CCNFP41002 AL079342.1-201ENST00000401460 267 ntBASIC3.96□□□□□ -1.78
CCNFP41002 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.96□□□□□ -1.78
CCNFP41002 MTND5P15-201ENST00000434246 349 ntBASIC3.96□□□□□ -1.78
CCNFP41002 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNFP41002 AL162151.2-201ENST00000448875 158 ntBASIC3.96□□□□□ -1.78
CCNFP41002 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.96□□□□□ -1.78
CCNFP41002 RN7SKP21-201ENST00000516503 220 ntBASIC3.96□□□□□ -1.78
CCNFP41002 RNU6-111P-201ENST00000517179 105 ntBASIC3.96□□□□□ -1.78
CCNFP41002 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
CCNFP41002 HSPE1P4-201ENST00000550617 308 ntBASIC3.96□□□□□ -1.78
CCNFP41002 MIR4300-201ENST00000581016 96 ntBASIC3.96□□□□□ -1.78
CCNFP41002 AC010900.2-201ENST00000604508 210 ntBASIC3.96□□□□□ -1.78
CCNFP41002 RMST_6.1-201ENST00000611980 203 ntBASIC3.96□□□□□ -1.78
CCNFP41002 AP001282.2-201ENST00000616149 309 ntBASIC3.96□□□□□ -1.78
CCNFP41002 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCNFP41002 AC091903.1-201ENST00000624322 454 ntBASIC3.96□□□□□ -1.78
CCNFP41002 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNFP41002 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
CCNFP41002 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.78
CCNFP41002 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCNFP41002 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCNFP41002 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 MAPK10-372ENST00000641954 3413 ntBASIC3.95□□□□□ -1.78
CCNFP41002 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 LINC02555-201ENST00000563933 1951 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AL353743.1-202ENST00000431724 1695 ntBASIC3.95□□□□□ -1.78
CCNFP41002 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCNFP41002 RNA5SP295-201ENST00000362655 121 ntBASIC3.95□□□□□ -1.78
CCNFP41002 snoU2_19.2-201ENST00000363024 80 ntBASIC3.95□□□□□ -1.78
CCNFP41002 RNU6-937P-201ENST00000384325 106 ntBASIC3.95□□□□□ -1.78
CCNFP41002 MIR153-2-201ENST00000385225 87 ntBASIC3.95□□□□□ -1.78
CCNFP41002 MIR23A-201ENST00000385245 73 ntBASIC3.95□□□□□ -1.78
CCNFP41002 SNORD115-46-201ENST00000390982 71 ntBASIC3.95□□□□□ -1.78
CCNFP41002 MIR1193-201ENST00000408109 78 ntBASIC3.95□□□□□ -1.78
CCNFP41002 MIR548H3-201ENST00000408771 118 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 AC004975.1-201ENST00000428733 208 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AL445305.1-201ENST00000432577 575 ntBASIC3.95□□□□□ -1.78
CCNFP41002 GPM6BP3-201ENST00000442797 145 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AP000870.1-201ENST00000472927 406 ntBASIC3.95□□□□□ -1.78
CCNFP41002 SCARNA24.2-201ENST00000516968 130 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 AL591034.3-201ENST00000605511 685 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AC012531.5-201ENST00000611375 151 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AC112484.5-201ENST00000624189 228 ntBASIC3.95□□□□□ -1.78
CCNFP41002 MAPK10-373ENST00000641983 6772 ntBASIC3.95□□□□□ -1.78
CCNFP41002 AL136164.4-201ENST00000625013 2135 ntBASIC3.95□□□□□ -1.78
CCNFP41002 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
CCNFP41002 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 OTUD4P1-201ENST00000237841 3067 ntBASIC3.94□□□□□ -1.78
CCNFP41002 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCNFP41002 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCNFP41002 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCNFP41002 Y_RNA.478-201ENST00000384358 107 ntBASIC3.94□□□□□ -1.78
CCNFP41002 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCNFP41002 SNORA57.1-201ENST00000391227 145 ntBASIC3.94□□□□□ -1.78
CCNFP41002 HLFP1-201ENST00000402375 499 ntBASIC3.94□□□□□ -1.78
CCNFP41002 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.94□□□□□ -1.78
CCNFP41002 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms