Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-1179P-201ENST00000384667 107 ntBASIC1.56□□□□□ -2.16
RFC3P40938 SRIP3-201ENST00000413200 219 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.56□□□□□ -2.16
RFC3P40938 RPS24P1-201ENST00000438550 371 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.56□□□□□ -2.16
RFC3P40938 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.56□□□□□ -2.16
RFC3P40938 SNORD11.1-201ENST00000459482 85 ntBASIC1.56□□□□□ -2.16
RFC3P40938 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.56□□□□□ -2.16
RFC3P40938 AF131216.2-201ENST00000512316 564 ntBASIC1.56□□□□□ -2.16
RFC3P40938 PTP4A1P4-201ENST00000512479 322 ntBASIC1.56□□□□□ -2.16
RFC3P40938 SNORA43.2-201ENST00000516652 128 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.56□□□□□ -2.16
RFC3P40938 AP003181.2-201ENST00000528941 181 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.56□□□□□ -2.16
RFC3P40938 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
RFC3P40938 MIR5697-201ENST00000578045 78 ntBASIC1.56□□□□□ -2.16
RFC3P40938 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
RFC3P40938 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
RFC3P40938 AC138749.5-201ENST00000611461 208 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AC116165.2-201ENST00000616705 206 ntBASIC1.56□□□□□ -2.16
RFC3P40938 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.56□□□□□ -2.16
RFC3P40938 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RFC3P40938 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
RFC3P40938 RNU6-944P-201ENST00000364023 107 ntBASIC1.55□□□□□ -2.16
RFC3P40938 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
RFC3P40938 SNORD14D-201ENST00000384390 87 ntBASIC1.55□□□□□ -2.16
RFC3P40938 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MIR558-201ENST00000384920 94 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MIR29B2-201ENST00000385055 81 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MRPL42P2-201ENST00000403169 426 ntBASIC1.55□□□□□ -2.16
RFC3P40938 Y_RNA.595-201ENST00000410403 105 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AL358453.1-201ENST00000422522 250 ntBASIC1.55□□□□□ -2.16
RFC3P40938 EIF4EP2-201ENST00000422816 654 ntBASIC1.55□□□□□ -2.16
RFC3P40938 BX510359.4-201ENST00000423750 193 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MED13P1-201ENST00000428342 171 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MTCYBP39-201ENST00000437562 491 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AL512286.1-201ENST00000439244 400 ntBASIC1.55□□□□□ -2.16
RFC3P40938 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.55□□□□□ -2.16
RFC3P40938 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 MTND2P7-201ENST00000521337 640 ntBASIC1.55□□□□□ -2.16
RFC3P40938 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 DUXAP5-201ENST00000529668 529 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 BNIP3P6-201ENST00000549284 499 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.55□□□□□ -2.16
RFC3P40938 AC007375.1-201ENST00000554513 578 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.55□□□□□ -2.16
RFC3P40938 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
RFC3P40938 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AC008751.2-201ENST00000597885 980 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.55□□□□□ -2.16
RFC3P40938 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.55□□□□□ -2.16
RFC3P40938 AC007792.1-201ENST00000623023 402 ntBASIC1.55□□□□□ -2.16
RFC3P40938 AC007671.2-201ENST00000637344 619 ntBASIC1.55□□□□□ -2.16
RFC3P40938 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFC3P40938 RNU6-212P-201ENST00000362642 104 ntBASIC1.54□□□□□ -2.16
RFC3P40938 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
RFC3P40938 SNORA24.1-201ENST00000384401 135 ntBASIC1.54□□□□□ -2.16
RFC3P40938 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RFC3P40938 RPS3AP36-201ENST00000398190 775 ntBASIC1.54□□□□□ -2.16
RFC3P40938 MTCYBP36-201ENST00000404146 440 ntBASIC1.54□□□□□ -2.16
RFC3P40938 RNU2-39P-201ENST00000410604 198 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.54□□□□□ -2.16
RFC3P40938 MTCYBP5-201ENST00000423752 1135 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.54□□□□□ -2.16
RFC3P40938 AC007283.2-201ENST00000424739 197 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AL589872.1-201ENST00000426602 288 ntBASIC1.54□□□□□ -2.16
RFC3P40938 Z73417.1-201ENST00000447373 778 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AL360271.2-201ENST00000447710 161 ntBASIC1.54□□□□□ -2.16
RFC3P40938 MTND2P14-201ENST00000482139 351 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AC117522.1-201ENST00000509821 380 ntBASIC1.54□□□□□ -2.16
RFC3P40938 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
RFC3P40938 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.54□□□□□ -2.16
RFC3P40938 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.54□□□□□ -2.16
RFC3P40938 AP003461.1-201ENST00000528866 78 ntBASIC1.54□□□□□ -2.16
RFC3P40938 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RFC3P40938 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.54□□□□□ -2.16
RFC3P40938 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
RFC3P40938 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.54□□□□□ -2.16
RFC3P40938 AC004908.3-201ENST00000610248 625 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AL159153.1-201ENST00000619688 317 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AC009878.1-201ENST00000621819 340 ntBASIC1.54□□□□□ -2.16
RFC3P40938 RMST_7.1-201ENST00000621935 268 ntBASIC1.54□□□□□ -2.16
RFC3P40938 AL157786.1-207ENST00000627771 695 ntBASIC1.54□□□□□ -2.16
RFC3P40938 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
RFC3P40938 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RFC3P40938 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
RFC3P40938 RNU6-371P-201ENST00000364283 108 ntBASIC1.53□□□□□ -2.16
RFC3P40938 RNU4-28P-201ENST00000364739 141 ntBASIC1.53□□□□□ -2.16
RFC3P40938 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RFC3P40938 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
RFC3P40938 RAP1BP3-201ENST00000407180 549 ntBASIC1.53□□□□□ -2.16
RFC3P40938 EEF1A1P40-201ENST00000412883 573 ntBASIC1.53□□□□□ -2.16
RFC3P40938 BTF3L4P1-201ENST00000413813 468 ntBASIC1.53□□□□□ -2.16
RFC3P40938 ELOCP4-201ENST00000420090 333 ntBASIC1.53□□□□□ -2.16
RFC3P40938 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms