Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIR4790-201ENST00000577799 79 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 RNU6-85P-201ENST00000605989 107 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC073308.1-201ENST00000623696 305 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.35□□□□□ -1.87
COL15A1P39059 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.34□□□□□ -1.87
COL15A1P39059 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL15A1P39059 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL15A1P39059 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.34□□□□□ -1.87
COL15A1P39059 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL15A1P39059 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL15A1P39059 Y_RNA.384-201ENST00000383909 102 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 RNU6-128P-201ENST00000383976 107 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 SNORA75B-201ENST00000384053 137 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 RNU6-1035P-201ENST00000384477 107 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 MIR518C-201ENST00000384822 101 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 MIR10A-201ENST00000385043 110 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL356057.2-201ENST00000403318 432 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.34□□□□□ -1.88
COL15A1P39059 MTND4P28-201ENST00000426217 387 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL627311.1-201ENST00000431514 115 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL078601.1-201ENST00000444542 271 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AC092001.1-201ENST00000453012 261 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.34□□□□□ -1.88
COL15A1P39059 snoU13.26-201ENST00000459452 105 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 RNU7-138P-201ENST00000459479 64 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 RNU1-86P-201ENST00000516108 154 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 Y_RNA.691-201ENST00000516611 103 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 RNU1-107P-201ENST00000516617 154 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL355375.2-201ENST00000574825 175 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 MIR4782-201ENST00000577987 79 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 MIR3609-201ENST00000582661 80 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL645944.1-201ENST00000603857 493 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AL355598.1-201ENST00000604169 202 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
COL15A1P39059 SNORA50A-202ENST00000629536 136 ntBASIC3.34□□□□□ -1.88
COL15A1P39059 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.34□□□□□ -1.88
COL15A1P39059 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
COL15A1P39059 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL15A1P39059 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL15A1P39059 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 AC138393.1-203ENST00000327086 343 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RNU6-562P-201ENST00000362731 107 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL15A1P39059 SNORA40C-201ENST00000391285 128 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 MIR548F5-201ENST00000408421 86 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RNU2-3P-201ENST00000410144 191 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.33□□□□□ -1.88
COL15A1P39059 AC074085.1-201ENST00000413598 418 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 CYCSP33-201ENST00000414485 327 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 PGBD4P6-201ENST00000421501 610 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.33□□□□□ -1.88
COL15A1P39059 AC098614.2-201ENST00000426040 255 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 HMGB1P9-201ENST00000429856 646 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 BRK1P2-201ENST00000442875 223 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.33□□□□□ -1.88
COL15A1P39059 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RNU6-991P-201ENST00000516168 107 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RNA5SP454-201ENST00000517231 127 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
COL15A1P39059 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.33□□□□□ -1.88
COL15A1P39059 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.33□□□□□ -1.88
COL15A1P39059 HMGB1P14-201ENST00000557424 591 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC007151.1-201ENST00000572774 483 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 MIR4635-201ENST00000583759 79 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC023043.2-201ENST00000589678 1026 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC007938.3-201ENST00000604965 623 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 FAM157A-202ENST00000615155 405 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 RMST_4.1-201ENST00000616886 107 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 AC022140.2-201ENST00000623500 188 ntBASIC3.33□□□□□ -1.88
COL15A1P39059 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL15A1P39059 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL15A1P39059 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL15A1P39059 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL15A1P39059 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 RNU6-884P-201ENST00000363889 107 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 Y_RNA.212-201ENST00000364177 102 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 SNORA51.4-201ENST00000364993 124 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 RNU1-100P-201ENST00000365255 165 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 SNORD116-11-201ENST00000383882 92 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 SNAP23P1-201ENST00000433229 246 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AC244505.4-201ENST00000434905 287 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AL359672.1-201ENST00000442302 409 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 SSXP5-201ENST00000443473 287 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 NDUFB1P2-201ENST00000449477 176 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 MTND4P17-201ENST00000470444 350 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 RN7SL283P-201ENST00000489055 303 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AC008526.1-201ENST00000509149 338 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms