Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPL3P39023 TRIAP1P1-201ENST00000427062 225 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC006946.1-201ENST00000429106 328 ntBASIC2.76□□□□□ -1.97
RPL3P39023 YME1L1P1-201ENST00000429435 297 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC236972.2-201ENST00000434979 310 ntBASIC2.76□□□□□ -1.97
RPL3P39023 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL3P39023 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPL3P39023 MTCO3P10-201ENST00000455912 772 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL3P39023 AC128713.1-201ENST00000471495 306 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC006445.1-201ENST00000491925 405 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC018437.1-201ENST00000492214 406 ntBASIC2.76□□□□□ -1.97
RPL3P39023 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC074250.1-201ENST00000511117 192 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL3P39023 AC008885.1-201ENST00000514930 301 ntBASIC2.76□□□□□ -1.97
RPL3P39023 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
RPL3P39023 SNORA43.2-201ENST00000516652 128 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.76□□□□□ -1.97
RPL3P39023 AC009314.1-201ENST00000603871 304 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AP000654.2-201ENST00000605633 586 ntBASIC2.76□□□□□ -1.97
RPL3P39023 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AL133215.3-201ENST00000609801 448 ntBASIC2.76□□□□□ -1.97
RPL3P39023 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.76□□□□□ -1.97
RPL3P39023 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
RPL3P39023 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.76□□□□□ -1.97
RPL3P39023 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL3P39023 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL3P39023 Y_RNA.138-201ENST00000363462 102 ntBASIC2.75□□□□□ -1.97
RPL3P39023 RNU6-1317P-201ENST00000364582 104 ntBASIC2.75□□□□□ -1.97
RPL3P39023 RNU6-336P-201ENST00000364891 107 ntBASIC2.75□□□□□ -1.97
RPL3P39023 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL3P39023 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 MIR23B-201ENST00000384832 97 ntBASIC2.75□□□□□ -1.97
RPL3P39023 Y_RNA.579-201ENST00000390939 94 ntBASIC2.75□□□□□ -1.97
RPL3P39023 FTH1P15-201ENST00000406984 280 ntBASIC2.75□□□□□ -1.97
RPL3P39023 Y_RNA.594-201ENST00000410373 140 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AL354751.2-201ENST00000415471 210 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL3P39023 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL3P39023 FTH1P25-201ENST00000447665 469 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AL031183.1-201ENST00000457667 207 ntBASIC2.75□□□□□ -1.97
RPL3P39023 RPL7P42-201ENST00000481005 679 ntBASIC2.75□□□□□ -1.97
RPL3P39023 RN7SL504P-201ENST00000494496 287 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AC083906.5-201ENST00000503722 328 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL3P39023 AC005741.1-201ENST00000511094 432 ntBASIC2.75□□□□□ -1.97
RPL3P39023 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 AP004607.1-201ENST00000524456 203 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AC006199.1-201ENST00000548728 219 ntBASIC2.75□□□□□ -1.97
RPL3P39023 NACAP3-201ENST00000552100 481 ntBASIC2.75□□□□□ -1.97
RPL3P39023 CPDP1-201ENST00000579660 283 ntBASIC2.75□□□□□ -1.97
RPL3P39023 MIR4444-1-201ENST00000581696 74 ntBASIC2.75□□□□□ -1.97
RPL3P39023 MIR4444-2-201ENST00000584390 74 ntBASIC2.75□□□□□ -1.97
RPL3P39023 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL3P39023 AC009229.3-201ENST00000608056 282 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
RPL3P39023 AC126177.8-201ENST00000618339 1015 ntBASIC2.75□□□□□ -1.97
RPL3P39023 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL3P39023 AC099654.10-201ENST00000640395 161 ntBASIC2.75□□□□□ -1.97
RPL3P39023 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RPL3P39023 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL3P39023 MTND5P1-201ENST00000445440 1375 ntBASIC2.74□□□□□ -1.97
RPL3P39023 Y_RNA.315-201ENST00000365117 102 ntBASIC2.74□□□□□ -1.97
RPL3P39023 RNU6-842P-201ENST00000384269 107 ntBASIC2.74□□□□□ -1.97
RPL3P39023 RNU6-43P-201ENST00000384302 107 ntBASIC2.74□□□□□ -1.97
RPL3P39023 RNU6-310P-201ENST00000384655 107 ntBASIC2.74□□□□□ -1.97
RPL3P39023 RNVU1-14-201ENST00000384770 164 ntBASIC2.74□□□□□ -1.97
RPL3P39023 SNORA75.4-201ENST00000391278 119 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL3P39023 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.74□□□□□ -1.97
RPL3P39023 RPS15AP5-201ENST00000436276 388 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL3P39023 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL3P39023 HMGN2P13-201ENST00000476476 274 ntBASIC2.74□□□□□ -1.97
RPL3P39023 RNU1-54P-201ENST00000517181 120 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AC109479.2-201ENST00000517842 174 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AL121821.2-201ENST00000556081 394 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.74□□□□□ -1.97
RPL3P39023 AC011494.1-201ENST00000596454 237 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AC024153.1-201ENST00000603103 365 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AL353621.2-201ENST00000605340 133 ntBASIC2.74□□□□□ -1.97
RPL3P39023 AL669831.3-213ENST00000636676 183 ntBASIC2.74□□□□□ -1.97
RPL3P39023 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.74□□□□□ -1.97
RPL3P39023 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RPL3P39023 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RPL3P39023 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RPL3P39023 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL3P39023 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RPL3P39023 MTND4P23-201ENST00000447723 1363 ntBASIC2.74□□□□□ -1.97
RPL3P39023 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPL3P39023 ADAM3A-203ENST00000461344 2157 ntBASIC2.73□□□□□ -1.97
RPL3P39023 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RPL3P39023 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPL3P39023 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms