Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RPS27AP14-201ENST00000422868 454 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AL589872.1-201ENST00000426602 288 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.6□□□□□ -2.15
BRCA1P38398 AL008629.1-201ENST00000438615 184 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AC003071.1-201ENST00000451219 789 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.6□□□□□ -2.15
BRCA1P38398 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.6□□□□□ -2.15
BRCA1P38398 RNU7-51P-201ENST00000516560 62 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AC016727.2-201ENST00000603988 621 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AC006338.1-201ENST00000618453 749 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.6□□□□□ -2.15
BRCA1P38398 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
BRCA1P38398 AL445523.1-201ENST00000451184 1362 ntBASIC1.6□□□□□ -2.15
BRCA1P38398 AL359851.1-201ENST00000569460 4997 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 RNA5SP111-201ENST00000411386 101 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.59□□□□□ -2.15
BRCA1P38398 MTCYBP39-201ENST00000437562 491 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 AC092001.1-201ENST00000453012 261 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 ARL2BPP4-201ENST00000506854 471 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.59□□□□□ -2.15
BRCA1P38398 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.59□□□□□ -2.15
BRCA1P38398 AC024619.4-201ENST00000580924 316 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.59□□□□□ -2.15
BRCA1P38398 AL138889.2-201ENST00000603883 242 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 AC144521.1-201ENST00000607148 956 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 AC098614.4-201ENST00000607601 462 ntBASIC1.59□□□□□ -2.15
BRCA1P38398 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.59□□□□□ -2.15
BRCA1P38398 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
BRCA1P38398 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.59□□□□□ -2.15
BRCA1P38398 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.59□□□□□ -2.16
BRCA1P38398 RNU6-925P-201ENST00000384629 104 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 MIR520E-201ENST00000384867 87 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 RNU11-3P-201ENST00000391111 133 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.58□□□□□ -2.16
BRCA1P38398 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.58□□□□□ -2.16
BRCA1P38398 RPL30P4-201ENST00000429309 333 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.58□□□□□ -2.16
BRCA1P38398 MTATP6P9-201ENST00000515039 680 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 RNA5SP137-201ENST00000516833 135 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 RNU6-677P-201ENST00000516914 101 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 CBX3P7-201ENST00000532876 502 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 MIR5692A1-201ENST00000580523 69 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 MIR4307-201ENST00000582802 84 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AL353778.1-201ENST00000603149 408 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AL139022.2-201ENST00000606934 443 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 uc_338.15-201ENST00000615470 191 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AC009090.3-201ENST00000616553 565 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 uc_338.11-201ENST00000619132 160 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AL159153.1-201ENST00000619688 317 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
BRCA1P38398 RNU6-636P-201ENST00000384598 107 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.58□□□□□ -2.16
BRCA1P38398 MTND1P20-201ENST00000430341 950 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.58□□□□□ -2.16
BRCA1P38398 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.58□□□□□ -2.16
BRCA1P38398 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.58□□□□□ -2.16
BRCA1P38398 AC005771.1-201ENST00000585581 349 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.58□□□□□ -2.16
BRCA1P38398 AL109918.3-201ENST00000603072 338 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.58□□□□□ -2.16
BRCA1P38398 AL139418.1-201ENST00000613613 177 ntBASIC1.58□□□□□ -2.16
BRCA1P38398 FARSBP1-201ENST00000435808 1778 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 Y_RNA.97-201ENST00000363094 102 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 RNU5A-2P-201ENST00000384337 116 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 RNU6-769P-201ENST00000384407 104 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 Y_RNA.534-201ENST00000384599 112 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 RNU2-8P-201ENST00000410727 190 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.57□□□□□ -2.16
BRCA1P38398 AL139824.2-201ENST00000458731 1095 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AP001324.2-201ENST00000461163 319 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 RPS27P21-201ENST00000486977 252 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.57□□□□□ -2.16
BRCA1P38398 MIR514B-201ENST00000516774 80 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.57□□□□□ -2.16
BRCA1P38398 AC107953.1-201ENST00000522216 297 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.57□□□□□ -2.16
BRCA1P38398 AC079598.5-201ENST00000547460 117 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.57□□□□□ -2.16
BRCA1P38398 RPL21P5-201ENST00000554662 472 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 MTND1P8-201ENST00000571424 950 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.57□□□□□ -2.16
BRCA1P38398 AC123912.5-201ENST00000605470 343 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 MTND4P9-201ENST00000507819 1346 ntBASIC1.57□□□□□ -2.16
BRCA1P38398 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
BRCA1P38398 RNU6-511P-201ENST00000363496 107 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 RNU6-817P-201ENST00000391083 104 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 RPL22P17-201ENST00000438729 315 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.56□□□□□ -2.16
BRCA1P38398 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.56□□□□□ -2.16
BRCA1P38398 AC245102.2-201ENST00000448956 180 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 SNRPFP3-201ENST00000457792 225 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 MTND2P33-201ENST00000506452 1031 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC119751.4-201ENST00000507498 357 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC022306.3-201ENST00000619930 550 ntBASIC1.56□□□□□ -2.16
BRCA1P38398 AC009878.1-201ENST00000621819 340 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms