Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC092436.3-201ENST00000511788 257 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 MRPS36P2-201ENST00000512569 299 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 RNU6-1153P-201ENST00000516760 105 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 Y_RNA.701-201ENST00000516812 110 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 AP005597.4-201ENST00000526762 229 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD12P35452 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD12P35452 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD12P35452 ATP5A1P2-202ENST00000616464 443 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 RN7SL853P-201ENST00000617250 223 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 AL160413.1-201ENST00000622780 310 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 MTND4LP32-201ENST00000636111 270 ntBASIC3.19□□□□□ -1.9
HOXD12P35452 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD12P35452 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD12P35452 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD12P35452 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD12P35452 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
HOXD12P35452 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD12P35452 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD12P35452 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXD12P35452 SNORD56.5-201ENST00000364281 72 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 SNORD14B-201ENST00000364533 90 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD12P35452 Y_RNA.431-201ENST00000384086 102 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RNU6-166P-201ENST00000384371 107 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RNU6-1297P-201ENST00000384415 104 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 MIR627-201ENST00000384979 97 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 MIR10A-201ENST00000385043 110 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RNU6-750P-201ENST00000390946 107 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 FO393413.1-201ENST00000402892 195 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AL356057.2-201ENST00000403318 432 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RNU6-1304P-201ENST00000411374 106 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 SKA2P1-201ENST00000425592 390 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXD12P35452 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD12P35452 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC025750.2-201ENST00000442609 450 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AL078601.1-201ENST00000444542 271 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD12P35452 SNORD19B-201ENST00000459623 84 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RPS27AP10-201ENST00000496103 208 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD12P35452 AC096745.1-201ENST00000509945 370 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC103810.1-201ENST00000579873 453 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC100830.2-201ENST00000581636 240 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD12P35452 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AL033523.1-201ENST00000605153 153 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AC126177.8-201ENST00000618339 1015 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 AL137790.1-201ENST00000634283 177 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
HOXD12P35452 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD12P35452 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD12P35452 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD12P35452 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXD12P35452 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD12P35452 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD12P35452 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD12P35452 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD12P35452 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-37P-201ENST00000362692 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-11P-201ENST00000364234 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-25P-201ENST00000383873 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-1-201ENST00000383898 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-48P-201ENST00000384161 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-36P-201ENST00000384172 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-4P-201ENST00000384205 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-5P-201ENST00000384238 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-3P-201ENST00000384314 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-16P-201ENST00000384385 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-15P-201ENST00000384534 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-2-201ENST00000384627 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-29P-201ENST00000384637 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-9-201ENST00000384776 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-33P-201ENST00000384793 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 MTCO2P27-201ENST00000420740 428 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 TOMM20P4-201ENST00000427861 435 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD12P35452 AC008885.1-201ENST00000514930 301 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD12P35452 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD12P35452 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AC123912.5-201ENST00000605470 343 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AL133255.1-201ENST00000606374 441 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 RNU6-6P-201ENST00000606623 107 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 MIR6128-201ENST00000615528 109 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AC084781.2-201ENST00000615568 161 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 AC010378.1-201ENST00000619270 362 ntBASIC3.17□□□□□ -1.9
HOXD12P35452 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms