Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU1-52P-201ENST00000384190 164 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 RNU6-908P-201ENST00000410160 94 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC127391.1-201ENST00000411737 98 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 OR9R1P-201ENST00000412200 877 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXC13P31276 PIGFP2-201ENST00000421400 651 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 RPL23AP30-201ENST00000432419 501 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC13P31276 MRPL50P4-201ENST00000446432 475 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXC13P31276 RPL22P13-201ENST00000493291 347 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.81□□□□□ -1.96
HOXC13P31276 RNU6-914P-201ENST00000516749 109 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AP005597.4-201ENST00000526762 229 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC13P31276 AC010186.2-204ENST00000537668 439 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.81□□□□□ -1.96
HOXC13P31276 MIR5571-201ENST00000577998 113 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 MIR3167-201ENST00000579623 85 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC018638.8-201ENST00000588755 281 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AL133173.2-201ENST00000614270 90 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC13P31276 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXC13P31276 RMST_7.1-201ENST00000621935 268 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 AC138305.3-201ENST00000624988 240 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 PISRT1-201ENST00000626175 531 ntBASIC2.81□□□□□ -1.96
HOXC13P31276 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXC13P31276 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HOXC13P31276 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HOXC13P31276 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HOXC13P31276 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.8□□□□□ -1.96
HOXC13P31276 ASNSP3-201ENST00000451989 1306 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 RNU6-486P-201ENST00000363116 107 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 SNORA4.3-201ENST00000365564 137 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 Y_RNA.431-201ENST00000384086 102 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 RNU6-738P-201ENST00000384531 106 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 MIR147B-201ENST00000390185 80 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 RPS4XP7-201ENST00000406274 780 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC13P31276 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC13P31276 RNA5SP112-201ENST00000515937 99 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 RNU6-277P-201ENST00000516272 106 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 RNU6-1183P-201ENST00000517054 60 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 AP003122.3-201ENST00000526316 255 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 AC084851.1-201ENST00000529105 249 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC13P31276 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.8□□□□□ -1.96
HOXC13P31276 AC020661.2-201ENST00000560114 134 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 MIR4782-201ENST00000577987 79 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXC13P31276 AC100810.6-201ENST00000638068 285 ntBASIC2.8□□□□□ -1.96
HOXC13P31276 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXC13P31276 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
HOXC13P31276 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXC13P31276 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HOXC13P31276 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
HOXC13P31276 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HOXC13P31276 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC13P31276 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC13P31276 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-451P-201ENST00000362921 107 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 Y_RNA.144-201ENST00000363521 113 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNY3P3-201ENST00000363816 102 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 SNORA63C-201ENST00000364578 129 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-282P-201ENST00000365357 103 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC13P31276 SNORA20.2-201ENST00000383922 131 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 Y_RNA.534-201ENST00000384599 112 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-19P-201ENST00000384718 107 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-220P-201ENST00000390919 107 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 SNORA3.2-201ENST00000408221 125 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.79□□□□□ -1.96
HOXC13P31276 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC13P31276 SNRPEP10-201ENST00000420249 274 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 BX276092.3-201ENST00000424182 230 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AL365400.1-201ENST00000431854 640 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AL161651.1-201ENST00000440882 223 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 CALM1P1-201ENST00000442082 433 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC132479.1-201ENST00000449160 144 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC13P31276 AC133134.1-201ENST00000466800 359 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC103851.1-201ENST00000506833 274 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU7-30P-201ENST00000516835 62 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RNU6-445P-201ENST00000516949 107 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC025755.1-201ENST00000521306 278 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
HOXC13P31276 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXC13P31276 AC006199.1-201ENST00000548728 219 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC13P31276 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC13P31276 MIR1273C-201ENST00000578669 77 ntBASIC2.79□□□□□ -1.96
HOXC13P31276 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC13P31276 AC245014.2-201ENST00000603689 287 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms