Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-541P-201ENST00000384709 110 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 UBA52P6-201ENST00000399822 382 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 HDGFP1-201ENST00000405943 252 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 RPL21P38-201ENST00000418090 167 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 AL157831.1-201ENST00000426134 473 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 SDAD1P3-201ENST00000427380 333 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AL353748.1-201ENST00000440753 474 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AL161651.1-201ENST00000440882 223 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC010099.1-201ENST00000455434 375 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 RPL30P12-201ENST00000474666 353 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 RPS4XP22-201ENST00000480755 780 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC098869.1-201ENST00000481627 292 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC016632.1-201ENST00000503994 196 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC12P31275 RNA5SP49-201ENST00000516450 115 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC12P31275 AP000867.2-201ENST00000532468 320 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC093023.1-201ENST00000547375 507 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 SNORA51-201ENST00000606420 132 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC092628.2-201ENST00000622492 339 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC12P31275 SNORA43.4-201ENST00000629559 138 ntBASIC3.73□□□□□ -1.81
HOXC12P31275 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HOXC12P31275 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HOXC12P31275 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXC12P31275 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC12P31275 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
HOXC12P31275 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC12P31275 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC12P31275 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC12P31275 ZNF826P-207ENST00000622273 1910 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC12P31275 RNU6-1141P-201ENST00000364520 107 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 Y_RNA.333-201ENST00000365274 102 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 Y_RNA.350-201ENST00000365409 98 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 MIR200C-201ENST00000384980 68 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXC12P31275 RNU6-121P-201ENST00000410525 99 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 RNU2-38P-201ENST00000410856 79 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC12P31275 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC12P31275 COX6B1P7-201ENST00000430845 235 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 RPL23AP83-201ENST00000434984 473 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC12P31275 AC016700.2-201ENST00000446011 156 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 RPL39P29-201ENST00000447779 157 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 TRBVB-201ENST00000477100 408 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AP001025.1-201ENST00000486139 332 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 RN7SL691P-201ENST00000494487 301 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 BTF3L4P4-201ENST00000506381 449 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC12P31275 AC073410.2-201ENST00000603240 332 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AC068831.7-201ENST00000616954 363 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 MIR6875-201ENST00000617506 72 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC12P31275 AC016588.2-201ENST00000632484 3021 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC12P31275 RBBP8P1-201ENST00000449447 1844 ntBASIC3.72□□□□□ -1.81
HOXC12P31275 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
HOXC12P31275 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
HOXC12P31275 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC12P31275 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HOXC12P31275 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 RNU1-15P-201ENST00000353977 144 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 RNU6-1301P-201ENST00000362724 104 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 RNU5B-2P-201ENST00000363036 113 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 Y_RNA.143-201ENST00000363520 106 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 MIR93-201ENST00000385024 80 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 RNU6ATAC-201ENST00000408749 126 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 AC023141.4-201ENST00000412031 328 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 AL714022.1-201ENST00000439897 151 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 AP000870.1-201ENST00000472927 406 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC12P31275 Y_RNA.713-201ENST00000517013 96 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 CKS1BP7-201ENST00000522230 235 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 AC100770.1-201ENST00000532310 322 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC12P31275 AC016256.1-201ENST00000547971 354 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 AC096772.1-201ENST00000609146 564 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC12P31275 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXC12P31275 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXC12P31275 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC12P31275 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HOXC12P31275 MTND5P6-201ENST00000422338 1798 ntBASIC3.71□□□□□ -1.82
HOXC12P31275 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC12P31275 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
HOXC12P31275 HAUS6P2-201ENST00000433254 2404 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 Y_RNA.14-201ENST00000362415 103 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 RNU6-525P-201ENST00000363685 104 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms