Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 RPL7P37-201ENST00000425095 738 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA11P31270 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA11P31270 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA11P31270 AL109933.2-201ENST00000452651 260 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
HOXA11P31270 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC087884.1-201ENST00000469738 328 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AL163540.1-201ENST00000485382 386 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 MTCYBP40-201ENST00000509390 1135 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA11P31270 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA11P31270 AC092593.1-201ENST00000515413 1815 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AL355836.1-201ENST00000555951 870 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC022336.2-201ENST00000568966 2538 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 LRRC37A5P-203ENST00000580181 585 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 MIR5690-201ENST00000583739 73 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC006504.6-201ENST00000590142 199 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 AC090132.2-201ENST00000615881 347 ntBASIC3.06□□□□□ -1.92
HOXA11P31270 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXA11P31270 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HOXA11P31270 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HOXA11P31270 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA11P31270 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
HOXA11P31270 AL049641.1-201ENST00000441055 1948 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 MTND5P10-201ENST00000603719 1809 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 MTND5P7-201ENST00000413558 1798 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 RNU6-562P-201ENST00000362731 107 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 SNORD56.5-201ENST00000364281 72 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RPL21P3-201ENST00000395517 478 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AL138827.1-201ENST00000402666 306 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.05□□□□□ -1.92
HOXA11P31270 PMCHL1-202ENST00000423102 261 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA11P31270 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AL360271.2-201ENST00000447710 161 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA11P31270 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA11P31270 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA11P31270 AC146507.2-201ENST00000460608 476 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AC093303.1-201ENST00000514549 295 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RNU6-1256P-201ENST00000516539 103 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RNU6-914P-201ENST00000516749 109 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RNA5SP291-201ENST00000517222 105 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RNU6-840P-201ENST00000517275 65 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 SNRPGP18-201ENST00000553000 214 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXA11P31270 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXA11P31270 OR4G2P-202ENST00000641004 1759 ntBASIC3.05□□□□□ -1.92
HOXA11P31270 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA11P31270 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA11P31270 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HOXA11P31270 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC093831.2-201ENST00000624393 3427 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC007785.2-201ENST00000598627 1916 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 SNORD3E-201ENST00000362899 217 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 MIR325-201ENST00000385260 98 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 SNORA75.4-201ENST00000391278 119 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 SNORA11.2-201ENST00000408318 127 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 RNU2-52P-201ENST00000410680 190 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 RNA5SP184-201ENST00000411071 108 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 RNU6-607P-201ENST00000411283 108 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 RNA5SP111-201ENST00000411386 101 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 Z85995.1-201ENST00000415547 335 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC063976.3-201ENST00000426849 329 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AL359672.1-201ENST00000442302 409 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA11P31270 Y_RNA.653-201ENST00000459091 95 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC026801.1-201ENST00000497178 464 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HOXA11P31270 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA11P31270 AC116337.1-201ENST00000509680 687 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA11P31270 RNU6-1016P-201ENST00000516689 94 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC087854.1-201ENST00000519706 414 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 MIR4513-201ENST00000581077 86 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AL158032.1-201ENST00000605401 106 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC090115.4-201ENST00000609970 188 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 AC244517.12-201ENST00000623581 663 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.04□□□□□ -1.92
HOXA11P31270 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.04□□□□□ -1.92
HOXA11P31270 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXA11P31270 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXA11P31270 MTND5P27-201ENST00000428871 1720 ntBASIC3.03□□□□□ -1.92
HOXA11P31270 RNU6-1115P-201ENST00000362490 106 ntBASIC3.03□□□□□ -1.92
HOXA11P31270 Y_RNA.145-201ENST00000363527 102 ntBASIC3.03□□□□□ -1.92
HOXA11P31270 Y_RNA.445-201ENST00000384168 102 ntBASIC3.03□□□□□ -1.92
HOXA11P31270 RNU6-601P-201ENST00000384540 107 ntBASIC3.03□□□□□ -1.92
HOXA11P31270 MIR9-1-201ENST00000385198 89 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms