Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SMURF2P1-201ENST00000514992 481 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.11□□□□□ -1.91
EPHA3P29320 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 Y_RNA.711-201ENST00000516993 102 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 CBX3P8-201ENST00000532412 525 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 MIR8076-201ENST00000611401 83 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.11□□□□□ -1.91
EPHA3P29320 AC241585.2-209ENST00000638217 143 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 AC009093.8-201ENST00000641769 292 ntBASIC3.11□□□□□ -1.91
EPHA3P29320 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.11□□□□□ -1.91
EPHA3P29320 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA3P29320 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA3P29320 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
EPHA3P29320 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA3P29320 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA3P29320 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.1□□□□□ -1.91
EPHA3P29320 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 SNORA5A-201ENST00000384111 134 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 Y_RNA.463-201ENST00000384271 102 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 RNU6-692P-201ENST00000384496 107 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 Y_RNA.533-201ENST00000384596 114 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA3P29320 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA3P29320 PMCHL1-202ENST00000423102 261 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.1□□□□□ -1.91
EPHA3P29320 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA3P29320 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA3P29320 MED28P2-201ENST00000475771 317 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.1□□□□□ -1.91
EPHA3P29320 AC106707.2-201ENST00000484182 374 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AL163540.1-201ENST00000485382 386 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
EPHA3P29320 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.1□□□□□ -1.91
EPHA3P29320 Y_RNA.661-201ENST00000516003 99 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 RNU6-307P-201ENST00000516743 106 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 ACA59.2-201ENST00000517061 156 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 RNU6-699P-201ENST00000517081 110 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 CR383656.8-201ENST00000549046 145 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA3P29320 MIR4429-201ENST00000580105 73 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AC005899.2-201ENST00000584353 90 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AC078795.3-201ENST00000602913 472 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 U3.45-201ENST00000607547 219 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 HMGB1P24-202ENST00000615653 685 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 AC039056.2-201ENST00000622261 511 ntBASIC3.1□□□□□ -1.91
EPHA3P29320 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
EPHA3P29320 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHA3P29320 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHA3P29320 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHA3P29320 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.09□□□□□ -1.91
EPHA3P29320 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EPHA3P29320 RNA5SP124-201ENST00000362739 110 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 RNU6-227P-201ENST00000362865 103 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 MIR449B-201ENST00000384995 97 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AL591034.2-201ENST00000402839 359 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC074117.2-201ENST00000417130 397 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.09□□□□□ -1.91
EPHA3P29320 HMGN2P20-201ENST00000437531 273 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC243964.1-201ENST00000441814 261 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 RPS12P18-201ENST00000442381 270 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.09□□□□□ -1.91
EPHA3P29320 AC114801.2-201ENST00000503825 781 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC022447.4-201ENST00000504053 364 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.09□□□□□ -1.91
EPHA3P29320 RNU6-976P-201ENST00000516086 111 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC009812.2-201ENST00000517657 457 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.09□□□□□ -1.91
EPHA3P29320 AC009163.5-201ENST00000575421 637 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 BNIP3P16-201ENST00000589779 534 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AL158827.2-201ENST00000602494 330 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC040896.1-201ENST00000613819 479 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.09□□□□□ -1.91
EPHA3P29320 MIR6075-201ENST00000620782 95 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AL691447.3-201ENST00000635020 330 ntBASIC3.09□□□□□ -1.91
EPHA3P29320 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.92
EPHA3P29320 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
EPHA3P29320 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EPHA3P29320 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EPHA3P29320 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 Y_RNA.112-201ENST00000363250 102 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 Y_RNA.123-201ENST00000363338 102 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 SNORA22B-201ENST00000383876 138 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 SNORA41-201ENST00000384675 132 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.08□□□□□ -1.92
EPHA3P29320 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.08□□□□□ -1.92
EPHA3P29320 AC011816.1-201ENST00000441346 546 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
EPHA3P29320 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.08□□□□□ -1.92
EPHA3P29320 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms