Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MED28P2-201ENST00000475771 317 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.23□□□□□ -2.05
PTPN4P29074 FAM92A1P2-202ENST00000504766 877 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 IGKV3-31-201ENST00000523109 329 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AP003392.2-201ENST00000527269 208 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AGGF1P4-201ENST00000568249 801 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC103987.3-201ENST00000582071 292 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AL670379.4-201ENST00000605279 254 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC104073.3-201ENST00000610942 955 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
PTPN4P29074 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.23□□□□□ -2.05
PTPN4P29074 SEPT14P19-203ENST00000633205 211 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.23□□□□□ -2.05
PTPN4P29074 ZNF680P1-201ENST00000436625 1469 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MTND4P1-201ENST00000457501 1466 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PTPN4P29074 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-858P-201ENST00000362436 107 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 SNORD3E-201ENST00000362899 217 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-1120P-201ENST00000362988 108 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU4-75P-201ENST00000364621 146 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 Y_RNA.318-201ENST00000365131 97 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-1029P-201ENST00000384109 107 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-1042P-201ENST00000384204 107 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-72P-201ENST00000384285 79 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-1179P-201ENST00000384667 107 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-606P-201ENST00000384721 111 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MIR578-201ENST00000384828 96 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MIR10A-201ENST00000385043 110 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-550P-201ENST00000391057 101 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 BTF3P7-201ENST00000407097 488 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.22□□□□□ -2.05
PTPN4P29074 OR6C66P-201ENST00000414917 930 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.22□□□□□ -2.05
PTPN4P29074 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPN4P29074 MTCO2P19-201ENST00000427513 598 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 DLGAP5P1-201ENST00000430307 464 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 VN1R108P-201ENST00000431580 830 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.22□□□□□ -2.05
PTPN4P29074 AL451074.3-201ENST00000437709 472 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL360271.2-201ENST00000447710 161 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 FDX1P2-201ENST00000450769 375 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RPS29P15-201ENST00000458329 171 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 GMFBP1-201ENST00000467831 427 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC079382.1-201ENST00000493346 557 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.22□□□□□ -2.05
PTPN4P29074 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.22□□□□□ -2.05
PTPN4P29074 AC104136.1-201ENST00000512969 394 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC010493.1-201ENST00000513479 292 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPN4P29074 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.22□□□□□ -2.05
PTPN4P29074 CR383656.8-201ENST00000549046 145 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.22□□□□□ -2.05
PTPN4P29074 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.22□□□□□ -2.05
PTPN4P29074 PSMA3P-201ENST00000555485 635 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPN4P29074 MTCYBP33-201ENST00000575007 1130 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MIR3126-201ENST00000577443 74 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AL355297.2-201ENST00000604792 129 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MIR7843-201ENST00000622274 79 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.22□□□□□ -2.05
PTPN4P29074 MTND5P26-201ENST00000426018 1752 ntBASIC2.22□□□□□ -2.05
PTPN4P29074 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
PTPN4P29074 RNA5SP432-201ENST00000362480 116 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU6-1287P-201ENST00000362914 107 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 SNORD114-19-201ENST00000363072 75 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU6-371P-201ENST00000364283 108 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU6-259P-201ENST00000383999 107 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU6-116P-201ENST00000384042 109 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNU6-1060P-201ENST00000384664 107 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 FTH1P15-201ENST00000406984 280 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 AL596276.1-201ENST00000434465 418 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PTPN4P29074 DNAJC19P4-201ENST00000440115 345 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.21□□□□□ -2.06
PTPN4P29074 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.21□□□□□ -2.06
PTPN4P29074 RPL23AP49-201ENST00000492925 468 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 RNA5SP503-201ENST00000517047 117 ntBASIC2.21□□□□□ -2.06
PTPN4P29074 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.21□□□□□ -2.06
PTPN4P29074 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PTPN4P29074 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.21□□□□□ -2.06
PTPN4P29074 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.21□□□□□ -2.06
PTPN4P29074 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPN4P29074 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.21□□□□□ -2.06
PTPN4P29074 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
PTPN4P29074 Y_RNA.1-201ENST00000352915 104 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RNU6-1010P-201ENST00000362757 107 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RNU6-843P-201ENST00000384454 104 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC068050.1-201ENST00000394891 380 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC000111.3-201ENST00000433478 193 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AC002486.1-201ENST00000435098 391 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 MTCO2P7-201ENST00000446518 666 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 PSPHP1-201ENST00000450062 261 ntBASIC2.2□□□□□ -2.06
PTPN4P29074 AL356010.1-201ENST00000456364 102 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms