Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNA5SP111-201ENST00000411386 101 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 UBE2V1P10-201ENST00000414685 269 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC138623.1-201ENST00000418060 216 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 HMGN2P3-201ENST00000433603 273 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 HMGN2P5-201ENST00000436882 273 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL022238.1-201ENST00000442557 355 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC003071.1-201ENST00000451219 789 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 UBE2DNL-203ENST00000474922 222 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RPL30P6-201ENST00000475925 342 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 MTND3P25-201ENST00000509243 135 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC090572.1-201ENST00000519251 160 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 CYCSP27-201ENST00000527643 293 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 IMMP1LP2-201ENST00000552954 492 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC093249.1-201ENST00000567049 203 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 MIR3915-201ENST00000578518 97 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 MIR548AC-201ENST00000585049 88 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL139286.2-201ENST00000606838 396 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC116312.1-201ENST00000606841 314 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL133173.2-201ENST00000614270 90 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AF246928.1-201ENST00000623768 87 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 AC079248.2-201ENST00000623779 326 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 MTND4P4-201ENST00000439033 1366 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HLA-DMAP28067 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HLA-DMAP28067 RNU6-338P-201ENST00000383888 105 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 SNORA20.2-201ENST00000383922 131 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 Y_RNA.576-201ENST00000384781 102 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 MIR186-201ENST00000384988 86 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 RN7SKP223-201ENST00000410582 62 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 RN7SKP284-201ENST00000411002 343 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 Z99497.1-201ENST00000421282 135 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 CYCSP46-201ENST00000423569 204 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC137499.1-201ENST00000427602 88 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 ISCA1P6-201ENST00000427740 390 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 MED13P1-201ENST00000428342 171 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 RPS24P1-201ENST00000438550 371 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AL445567.1-201ENST00000439121 144 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AL133217.1-201ENST00000450980 425 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 MTCO3P9-201ENST00000506989 781 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC117522.1-201ENST00000509821 380 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 RNU2-53P-201ENST00000516257 147 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC106038.2-201ENST00000520706 568 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC060788.1-201ENST00000521318 469 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC110588.1-201ENST00000559699 137 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC073539.2-201ENST00000597113 165 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AL138889.2-201ENST00000603883 242 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AL360219.1-201ENST00000610230 366 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 RMST_6.1-201ENST00000611980 203 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC122133.1-201ENST00000613964 233 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC064859.1-201ENST00000624741 174 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AC019226.2-201ENST00000625973 424 ntBASIC1.4□□□□□ -2.19
HLA-DMAP28067 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DMAP28067 Y_RNA.111-201ENST00000363248 100 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 RNU6-297P-201ENST00000384636 107 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 RPL17P50-201ENST00000396131 546 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 RPS3AP3-201ENST00000411933 242 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AL139415.2-201ENST00000431968 163 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 NDUFB1P2-201ENST00000449477 176 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 RPL30P12-201ENST00000474666 353 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC119751.5-201ENST00000514077 770 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 SNORA43.2-201ENST00000516652 128 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC012414.6-201ENST00000568241 401 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC090578.1-201ENST00000604955 591 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 AC092354.1-201ENST00000606057 376 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms