Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FO393413.1-201ENST00000402892 195 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC008267.5-201ENST00000424928 265 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AIMP1P2-201ENST00000425294 312 ntBASIC3□□□□□ -1.93
TNFSF4P23510 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF4P23510 UBBP3-201ENST00000445497 241 ntBASIC3□□□□□ -1.93
TNFSF4P23510 EEF1B2P7-201ENST00000451177 676 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF4P23510 AC008571.1-201ENST00000467232 300 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AIG1P1-201ENST00000503376 148 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3□□□□□ -1.93
TNFSF4P23510 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF4P23510 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF4P23510 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF4P23510 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3□□□□□ -1.93
TNFSF4P23510 AC016256.1-201ENST00000547971 354 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC007375.1-201ENST00000554513 578 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF4P23510 MIR3136-201ENST00000583498 78 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AC113139.1-201ENST00000605049 239 ntBASIC3□□□□□ -1.93
TNFSF4P23510 AL132765.2-201ENST00000610812 351 ntBASIC3□□□□□ -1.93
TNFSF4P23510 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3□□□□□ -1.93
TNFSF4P23510 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TNFSF4P23510 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF4P23510 RNU6-784P-201ENST00000384330 106 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 Y_RNA.474-201ENST00000384341 102 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TNFSF4P23510 CBX3P9-201ENST00000402326 552 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AL591034.2-201ENST00000402839 359 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 RNU2-41P-201ENST00000410991 178 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AL445687.1-201ENST00000439946 251 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF4P23510 snoU13.22-201ENST00000459428 104 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AC073901.1-201ENST00000462471 408 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC104564.1-201ENST00000493028 407 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF4P23510 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF4P23510 RPL30P11-203ENST00000598995 310 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC018462.2-201ENST00000605375 395 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 U4.6-201ENST00000621618 127 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF4P23510 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TNFSF4P23510 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF4P23510 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF4P23510 AC073073.2-201ENST00000609827 2578 ntBASIC2.99□□□□□ -1.93
TNFSF4P23510 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFSF4P23510 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFSF4P23510 Y_RNA.123-201ENST00000363338 102 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 RNA5SP42-201ENST00000364278 115 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 RNU4-56P-201ENST00000364700 142 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 MIR670-201ENST00000390142 98 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 SNORA26.3-201ENST00000391119 136 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AC022028.1-201ENST00000412054 408 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFSF4P23510 EIF4EP2-201ENST00000422816 654 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 Z82205.1-201ENST00000428456 297 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF4P23510 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFSF4P23510 MTND4P17-201ENST00000470444 350 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 RPS4XP22-201ENST00000480755 780 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 SNORA70.19-201ENST00000516717 90 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 RN7SKP40-201ENST00000517211 242 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AC021231.3-201ENST00000558497 370 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF4P23510 RPS3AP23-202ENST00000574601 686 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 MIR4429-201ENST00000580105 73 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AC090616.3-201ENST00000582184 217 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFSF4P23510 AL670379.2-201ENST00000604983 252 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 AC009233.1-201ENST00000616477 371 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 MIR6075-201ENST00000620782 95 ntBASIC2.98□□□□□ -1.93
TNFSF4P23510 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFSF4P23510 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF4P23510 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF4P23510 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TNFSF4P23510 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
TNFSF4P23510 SNORA73.2-201ENST00000364946 201 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 Y_RNA.356-201ENST00000365475 113 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 Y_RNA.384-201ENST00000383909 102 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 Y_RNA.504-201ENST00000384481 104 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 RNU6-220P-201ENST00000390919 107 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 RNU6-954P-201ENST00000411355 107 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFSF4P23510 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFSF4P23510 USP9YP30-201ENST00000430729 455 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 GPM6BP3-201ENST00000442797 145 ntBASIC2.97□□□□□ -1.93
TNFSF4P23510 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFSF4P23510 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFSF4P23510 AL357552.1-201ENST00000445254 415 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms