Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 UBL5P4-201ENST00000562584 236 ntBASIC4.69□□□□□ -1.66
RFX1P22670 MIR3136-201ENST00000583498 78 ntBASIC4.69□□□□□ -1.66
RFX1P22670 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.69□□□□□ -1.66
RFX1P22670 AC098479.1-201ENST00000609225 154 ntBASIC4.69□□□□□ -1.66
RFX1P22670 SNX18P1Y-201ENST00000616231 511 ntBASIC4.69□□□□□ -1.66
RFX1P22670 MIR3653-201ENST00000625572 110 ntBASIC4.69□□□□□ -1.66
RFX1P22670 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
RFX1P22670 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFX1P22670 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFX1P22670 AL136164.4-201ENST00000625013 2135 ntBASIC4.69□□□□□ -1.66
RFX1P22670 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX1P22670 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RFX1P22670 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX1P22670 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.68□□□□□ -1.66
RFX1P22670 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
RFX1P22670 Y_RNA.65-201ENST00000362846 100 ntBASIC4.68□□□□□ -1.66
RFX1P22670 Y_RNA.277-201ENST00000364754 102 ntBASIC4.68□□□□□ -1.66
RFX1P22670 RNA5SP366-201ENST00000365454 123 ntBASIC4.68□□□□□ -1.66
RFX1P22670 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFX1P22670 RNU6-102P-201ENST00000384485 104 ntBASIC4.68□□□□□ -1.66
RFX1P22670 RNU5A-5P-201ENST00000411054 116 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AC096649.2-201ENST00000416186 393 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX1P22670 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX1P22670 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.68□□□□□ -1.66
RFX1P22670 RPL30P12-201ENST00000474666 353 ntBASIC4.68□□□□□ -1.66
RFX1P22670 PPIAP15-201ENST00000479662 484 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX1P22670 RNU4-71P-201ENST00000516258 113 ntBASIC4.68□□□□□ -1.66
RFX1P22670 Y_RNA.700-201ENST00000516806 100 ntBASIC4.68□□□□□ -1.66
RFX1P22670 SCARNA24.2-201ENST00000516968 130 ntBASIC4.68□□□□□ -1.66
RFX1P22670 IFITM8P-201ENST00000522529 394 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AP003730.1-201ENST00000524605 285 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AP000867.2-201ENST00000532468 320 ntBASIC4.68□□□□□ -1.66
RFX1P22670 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX1P22670 AK6P2-201ENST00000549020 471 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AC025884.1-201ENST00000556034 378 ntBASIC4.68□□□□□ -1.66
RFX1P22670 MIR5695-201ENST00000579717 85 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AC006130.2-201ENST00000586202 326 ntBASIC4.68□□□□□ -1.66
RFX1P22670 BRDTP1-201ENST00000605735 677 ntBASIC4.68□□□□□ -1.66
RFX1P22670 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RFX1P22670 uc_338.13-201ENST00000618243 179 ntBASIC4.68□□□□□ -1.66
RFX1P22670 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX1P22670 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.68□□□□□ -1.66
RFX1P22670 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX1P22670 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX1P22670 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.68□□□□□ -1.66
RFX1P22670 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFX1P22670 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX1P22670 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.67□□□□□ -1.66
RFX1P22670 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFX1P22670 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RFX1P22670 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX1P22670 RNU4-90P-201ENST00000362773 141 ntBASIC4.67□□□□□ -1.66
RFX1P22670 RNU6-1266P-201ENST00000362794 105 ntBASIC4.67□□□□□ -1.66
RFX1P22670 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RFX1P22670 SNORA11F-201ENST00000408237 128 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AC005002.2-201ENST00000438228 269 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.67□□□□□ -1.66
RFX1P22670 AP000705.1-201ENST00000454567 350 ntBASIC4.67□□□□□ -1.66
RFX1P22670 HSPE1P25-201ENST00000455484 251 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AL441985.1-201ENST00000457727 251 ntBASIC4.67□□□□□ -1.66
RFX1P22670 snoU13.22-201ENST00000459428 104 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AC007215.1-201ENST00000464893 276 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AC107626.1-201ENST00000471084 183 ntBASIC4.67□□□□□ -1.66
RFX1P22670 GZMAP1-201ENST00000503054 631 ntBASIC4.67□□□□□ -1.66
RFX1P22670 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.67□□□□□ -1.66
RFX1P22670 AC006064.5-201ENST00000541782 248 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.67□□□□□ -1.66
RFX1P22670 MIR4286-201ENST00000580651 93 ntBASIC4.67□□□□□ -1.66
RFX1P22670 MIR4423-201ENST00000580922 80 ntBASIC4.67□□□□□ -1.66
RFX1P22670 AC068831.7-201ENST00000616954 363 ntBASIC4.67□□□□□ -1.66
RFX1P22670 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFX1P22670 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RFX1P22670 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFX1P22670 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RFX1P22670 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFX1P22670 Y_RNA.117-201ENST00000363294 101 ntBASIC4.66□□□□□ -1.66
RFX1P22670 RNA5SP175-201ENST00000364275 119 ntBASIC4.66□□□□□ -1.66
RFX1P22670 RNU6-290P-201ENST00000365212 101 ntBASIC4.66□□□□□ -1.66
RFX1P22670 AP000567.1-201ENST00000406413 156 ntBASIC4.66□□□□□ -1.66
RFX1P22670 MIR1179-201ENST00000408703 91 ntBASIC4.66□□□□□ -1.66
RFX1P22670 RNA5SP38-201ENST00000410750 119 ntBASIC4.66□□□□□ -1.66
RFX1P22670 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX1P22670 RPL26P26-201ENST00000480251 434 ntBASIC4.66□□□□□ -1.66
RFX1P22670 RNU6-182P-201ENST00000516970 105 ntBASIC4.66□□□□□ -1.66
RFX1P22670 CYCSP23-201ENST00000519781 313 ntBASIC4.66□□□□□ -1.66
RFX1P22670 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX1P22670 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
RFX1P22670 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX1P22670 AC130289.1-201ENST00000577321 73 ntBASIC4.66□□□□□ -1.66
RFX1P22670 MIR3944-201ENST00000581277 108 ntBASIC4.66□□□□□ -1.66
RFX1P22670 MIR3158-1-201ENST00000583596 81 ntBASIC4.66□□□□□ -1.66
RFX1P22670 MIR432-201ENST00000606207 94 ntBASIC4.66□□□□□ -1.66
RFX1P22670 SNORD113-5-201ENST00000607261 78 ntBASIC4.66□□□□□ -1.66
RFX1P22670 AC112484.5-201ENST00000624189 228 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms